RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TAL1P17542 331 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 RXRAP19793 462 aa15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 FUT2Q10981 343 aa15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ARMCX2Q7L311 632 aa15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 HOMER1Q86YM7 354 aa15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ZNF274Q96GC6 653 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 MPHOSPH6Q99547 160 aaKnown RBP15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ASTN1O14525 1302 aa15.14■□□□□ 0.01
HLA-DQA1-201ENST00000343139 GOLGA8AA7E2F4 631 aa15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 GOLGA8BA8MQT2 603 aa15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 OPLAHO14841 1288 aa15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 TFRCP02786 760 aaKnown RBP15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 EDNRBP24530 442 aa15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 METAP2P50579 478 aaKnown RBP eCLIP15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 HSD17B4P51659 736 aa15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 APOBRQ0VD83 1088 aa15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 TOB2Q14106 344 aaPredicted RBP15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 SLC30A10Q6XR72 485 aa15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 CCDC144CPQ8IYA2 1237 aa15.13■□□□□ 0.01
HLA-DQA1-201ENST00000343139 hCG_1984214I3L0E3 225 aa15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 AKR1A1P14550 325 aa15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ACVR2BQ13705 512 aa15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ZNF713Q8N859 430 aaPredicted RBP15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 SYTL5Q8TDW5 730 aaPredicted RBP15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 UPF3BQ9BZI7 483 aaKnown RBP15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 KATNBL1Q9H079 304 aa15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 PDRG1Q9NUG6 133 aa15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 RBM27Q9P2N5 1060 aaKnown RBP15.12■□□□□ 0.01
HLA-DQA1-201ENST00000343139 CALML3P27482 149 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 CNGA1P29973 690 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 PDIA3P30101 505 aaKnown RBP15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 CDC27P30260 824 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 MLLT1Q03111 559 aaPredicted RBP15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ANKRD1Q15327 319 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 PRAMEF19Q5SWL8 479 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 IL27Q8NEV9 243 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 IWS1Q96ST2 819 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 VTA1Q9NP79 307 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 FAM184BQ9ULE4 1060 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 CNTNAP5Q8WYK1 1306 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 RAB11FIP4Q86YS3 637 aa15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 NSUN6Q8TEA1 469 aaKnown RBP15.11■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ZNFX1Q9P2E3 1918 aaKnown RBP15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 GCOM1H8Y6P7 765 aaPredicted RBP15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 PIK3CDO00329 1044 aa15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 CFBP00751 764 aa15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 POLR2MP0CAP2 368 aa15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 RARBP10826 455 aa15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ADD1P35611 737 aaKnown RBP15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 PPP1R18Q6NYC8 613 aa15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 CMTR1Q8N1G2 835 aaKnown RBP15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ARRDC4Q8NCT1 418 aa15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 TBC1D5Q92609 795 aa15.1■□□□□ 0.01
HLA-DQA1-201ENST00000343139 FARP2O94887 1054 aaPredicted RBP15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 IFNAR1P17181 557 aa15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 RBM25P49756 843 aaKnown RBP15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 NKX3-2P78367 333 aa15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 NTRK3Q16288 839 aa15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 PURBQ96QR8 312 aaKnown RBP15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 RMDN3Q96TC7 470 aa15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 COL20A1Q9P218 1284 aa15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 ZHX1Q9UKY1 873 aaPredicted RBP15.09■□□□□ 0.01
HLA-DQA1-201ENST00000343139 PLXNA1Q9UIW2 1896 aa15.08■□□□□ 0.01
HLA-DQA1-201ENST00000343139 RBM47A0AV96 593 aaKnown RBP15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 DNM1LO00429 736 aa15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 DUSP11O75319 330 aaKnown RBP15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 CCDC144BQ3MJ40 725 aa15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 IQSEC1Q6DN90 963 aa15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 TAPT1Q6NXT6 567 aa15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 NECAB2Q7Z6G3 386 aa15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 CCDC82Q8N4S0 544 aa15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 TAAR1Q96RJ0 339 aa15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 RNF26Q9BY78 433 aaPredicted RBP15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 NAP1L2Q9ULW6 460 aaPredicted RBP15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 Q9Y3F1 56 aa15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 V9GY48 417 aaPredicted RBP15.08■□□□□ 0
HLA-DQA1-201ENST00000343139 PRPF3O43395 683 aaKnown RBP15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 COL6A1P12109 1028 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 PDE4DQ08499 809 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 PIBF1Q8WXW3 757 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 GLT8D2Q9H1C3 349 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 UPF2Q9HAU5 1272 aaKnown RBP15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 PXMP2Q9NR77 195 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 FRMPD4Q14CM0 1322 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 CST5P28325 142 aaPredicted RBP15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 STXBP2Q15833 593 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 PFKFB3Q16875 520 aaPredicted RBP15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 ARHGEF16Q5VV41 709 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 RNF180Q86T96 592 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 CUL5Q93034 780 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 C22orf23Q9BZE7 217 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 UPF3AQ9H1J1 476 aaKnown RBP15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 PSTPIP2Q9H939 334 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 XPNPEP3Q9NQH7 507 aa15.07■□□□□ 0
HLA-DQA1-201ENST00000343139 BARHL2Q9NY43 387 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms