RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 CD320Q9NPF0 282 aa20.11■□□□□ 0.81
TRA2B-202ENST00000342294 MYH4Q9Y623 1939 aa20.11■□□□□ 0.81
TRA2B-202ENST00000342294 PITPNM1O00562 1244 aa20.1■□□□□ 0.81
TRA2B-202ENST00000342294 IQCF3P0C7M6 154 aa20.1■□□□□ 0.81
TRA2B-202ENST00000342294 SPRED2Q7Z698 418 aa20.1■□□□□ 0.81
TRA2B-202ENST00000342294 MYH7P12883 1935 aa20.1■□□□□ 0.81
TRA2B-202ENST00000342294 RBM47A0AV96 593 aaKnown RBP20.09■□□□□ 0.81
TRA2B-202ENST00000342294 FAM86C2PA6NEL3 165 aa20.09■□□□□ 0.81
TRA2B-202ENST00000342294 APPBP2Q92624 585 aa20.09■□□□□ 0.81
TRA2B-202ENST00000342294 MTG1Q9BT17 334 aaPredicted RBP20.09■□□□□ 0.81
TRA2B-202ENST00000342294 ZBTB40Q9NUA8 1239 aa20.09■□□□□ 0.81
TRA2B-202ENST00000342294 MUC6Q6W4X9 2439 aa20.09■□□□□ 0.81
TRA2B-202ENST00000342294 KIF28PB7ZC32 967 aa20.08■□□□□ 0.81
TRA2B-202ENST00000342294 MCCP23508 829 aa20.08■□□□□ 0.81
TRA2B-202ENST00000342294 SLC1A4P43007 532 aa20.08■□□□□ 0.81
TRA2B-202ENST00000342294 SNAP25P60880 206 aa20.08■□□□□ 0.81
TRA2B-202ENST00000342294 NBPF20Q3BBV1 942 aa20.08■□□□□ 0.81
TRA2B-202ENST00000342294 KBTBD3Q8NAB2 608 aa20.08■□□□□ 0.81
TRA2B-202ENST00000342294 WDR11Q9BZH6 1224 aa20.08■□□□□ 0.81
TRA2B-202ENST00000342294 LMCD1Q9NZU5 365 aa20.08■□□□□ 0.81
TRA2B-202ENST00000342294 SCN5AQ14524 2016 aa20.08■□□□□ 0.8
TRA2B-202ENST00000342294 GPAA1O43292 621 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 MYL3P08590 195 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 GNAT2P19087 354 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 TDO2P48775 406 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 CPT1AP50416 773 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 IKQ13123 557 aaPredicted RBP20.07■□□□□ 0.8
TRA2B-202ENST00000342294 RCSD1Q6JBY9 416 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 NFRKBQ6P4R8 1299 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 NSMFQ6X4W1 530 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 PRR12Q9ULL5 1215 aa20.07■□□□□ 0.8
TRA2B-202ENST00000342294 ISY1Q9ULR0 285 aaKnown RBP20.07■□□□□ 0.8
TRA2B-202ENST00000342294 LOC102724159A0A0B4J2E5 919 aa20.06■□□□□ 0.8
TRA2B-202ENST00000342294 BAIAP3O94812 1187 aa20.06■□□□□ 0.8
TRA2B-202ENST00000342294 TSPY3P0CV98 308 aa20.06■□□□□ 0.8
TRA2B-202ENST00000342294 TSPY8P0CW00 308 aa20.06■□□□□ 0.8
TRA2B-202ENST00000342294 TFAP4Q01664 338 aa20.06■□□□□ 0.8
TRA2B-202ENST00000342294 PWP2Q15269 919 aaKnown RBP20.06■□□□□ 0.8
TRA2B-202ENST00000342294 KCTD1Q719H9 257 aa20.06■□□□□ 0.8
TRA2B-202ENST00000342294 IFNL3Q8IZI9 196 aa20.06■□□□□ 0.8
TRA2B-202ENST00000342294 RETREG2Q8NC44 543 aa20.06■□□□□ 0.8
TRA2B-202ENST00000342294 FTOQ9C0B1 505 aaKnown RBP eCLIP20.06■□□□□ 0.84e-15■□□□□ 8.7
TRA2B-202ENST00000342294 SCN10AQ9Y5Y9 1956 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 LCHNA4D1U4 455 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 PATL2C9JE40 543 aaKnown RBP20.05■□□□□ 0.8
TRA2B-202ENST00000342294 RNF113AO15541 343 aaKnown RBP20.05■□□□□ 0.8
TRA2B-202ENST00000342294 ALDH5A1P51649 535 aaPredicted RBP20.05■□□□□ 0.8
TRA2B-202ENST00000342294 PTPN11Q06124 597 aaPredicted RBP20.05■□□□□ 0.8
TRA2B-202ENST00000342294 BAATQ14032 418 aaPredicted RBP20.05■□□□□ 0.8
TRA2B-202ENST00000342294 GPNMBQ14956 572 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 FAM47CQ5HY64 1035 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 PPP1R13LQ8WUF5 828 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 CHMP4CQ96CF2 233 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 GPHNQ9NQX3 736 aaPredicted RBP20.05■□□□□ 0.8
TRA2B-202ENST00000342294 ADD3Q9UEY8 706 aaKnown RBP20.05■□□□□ 0.8
TRA2B-202ENST00000342294 CCPG1Q9ULG6 757 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 BRWD1Q9NSI6 2320 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 LCTP09848 1927 aa20.05■□□□□ 0.8
TRA2B-202ENST00000342294 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.04■□□□□ 0.8
TRA2B-202ENST00000342294 A6NJR5 290 aa20.04■□□□□ 0.8
TRA2B-202ENST00000342294 M0R2C6 588 aa20.04■□□□□ 0.8
TRA2B-202ENST00000342294 ICAM1P05362 532 aa20.04■□□□□ 0.8
TRA2B-202ENST00000342294 BFSP2Q13515 415 aa20.04■□□□□ 0.8
TRA2B-202ENST00000342294 ALYREFQ86V81 257 aaKnown RBP20.04■□□□□ 0.8
TRA2B-202ENST00000342294 OR6J1Q8NGC5 347 aa20.04■□□□□ 0.8
TRA2B-202ENST00000342294 ECHDC1Q9NTX5 307 aa20.04■□□□□ 0.8
TRA2B-202ENST00000342294 TET1Q8NFU7 2136 aa20.03■□□□□ 0.8
TRA2B-202ENST00000342294 PRR33A8MZF0 331 aa20.03■□□□□ 0.8
TRA2B-202ENST00000342294 KPNA6O60684 536 aa20.03■□□□□ 0.8
TRA2B-202ENST00000342294 APPP05067 770 aa20.03■□□□□ 0.8
TRA2B-202ENST00000342294 ZFYP08048 801 aaPredicted RBP20.03■□□□□ 0.8
TRA2B-202ENST00000342294 PDE4BQ07343 736 aa20.03■□□□□ 0.8
TRA2B-202ENST00000342294 RASGRP2Q7LDG7 609 aa20.03■□□□□ 0.8
TRA2B-202ENST00000342294 GDPD5Q8WTR4 605 aa20.03■□□□□ 0.8
TRA2B-202ENST00000342294 LRRCC1Q9C099 1032 aa20.03■□□□□ 0.8
TRA2B-202ENST00000342294 SMARCA5O60264 1052 aaPredicted RBP20.02■□□□□ 0.8
TRA2B-202ENST00000342294 WDR5P61964 334 aaKnown RBP20.02■□□□□ 0.8
TRA2B-202ENST00000342294 LRRFIP1Q32MZ4 808 aaKnown RBP20.02■□□□□ 0.8
TRA2B-202ENST00000342294 FAM178BQ8IXR5 827 aa20.02■□□□□ 0.8
TRA2B-202ENST00000342294 CTAGE1Q96RT6 745 aa20.02■□□□□ 0.8
TRA2B-202ENST00000342294 RANBP17Q9H2T7 1088 aaKnown RBP20.02■□□□□ 0.8
TRA2B-202ENST00000342294 UBE2ZQ9H832 354 aaPredicted RBP20.02■□□□□ 0.8
TRA2B-202ENST00000342294 SUGCTQ9HAC7 445 aa20.02■□□□□ 0.8
TRA2B-202ENST00000342294 IL17RBQ9NRM6 502 aa20.02■□□□□ 0.8
TRA2B-202ENST00000342294 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.8
TRA2B-202ENST00000342294 NFIBO00712 420 aa20.01■□□□□ 0.79
TRA2B-202ENST00000342294 NKRFO15226 690 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRA2B-202ENST00000342294 MS4A1P11836 297 aa20.01■□□□□ 0.79
TRA2B-202ENST00000342294 KCNJ6P48051 423 aa20.01■□□□□ 0.79
TRA2B-202ENST00000342294 NOVP48745 357 aa20.01■□□□□ 0.79
TRA2B-202ENST00000342294 LEXMQ3ZCV2 418 aa20.01■□□□□ 0.79
TRA2B-202ENST00000342294 BRDTQ58F21 947 aaPredicted RBP20.01■□□□□ 0.79
TRA2B-202ENST00000342294 PPP4R3BQ5MIZ7 849 aa20.01■□□□□ 0.79
TRA2B-202ENST00000342294 TMCO2Q7Z6W1 182 aaPredicted RBP20.01■□□□□ 0.79
TRA2B-202ENST00000342294 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRA2B-202ENST00000342294 TANC1Q9C0D5 1861 aa20.01■□□□□ 0.79
TRA2B-202ENST00000342294 EDNRBP24530 442 aa20■□□□□ 0.79
TRA2B-202ENST00000342294 ERVK-21P61565 698 aa20■□□□□ 0.79
TRA2B-202ENST00000342294 PPARAQ07869 468 aa20■□□□□ 0.79
TRA2B-202ENST00000342294 BTNL9Q6UXG8 535 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms