RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 CTAGE3PQ8IX95 158 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 NBPF15Q8N660 670 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 KRT12Q99456 494 aa13.76□□□□□ -0.21
BRPF3-201ENST00000339717 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
BRPF3-201ENST00000339717 GIPC1O14908 333 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 CYTH3O43739 400 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 HSPA1LP34931 641 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 ITIH4Q14624 930 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 RILPQ96NA2 401 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 LRRC37BQ96QE4 947 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 ALG1Q9BT22 464 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 MRGBPQ9NV56 204 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 AP1B1Q10567 949 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 CEP55Q53EZ4 464 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 SEPT8Q92599 483 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 PASKQ96RG2 1323 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 PIK3C2GO75747 1445 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 KRIT1O00522 736 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 SART1O43290 800 aaKnown RBP13.75□□□□□ -0.21
BRPF3-201ENST00000339717 ALOX15P16050 662 aaPredicted RBP13.75□□□□□ -0.21
BRPF3-201ENST00000339717 CTNNA2P26232 953 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 NEK9Q8TD19 979 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 ATAD3AQ9NVI7 634 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 DDX20Q9UHI6 824 aaKnown RBP13.75□□□□□ -0.21
BRPF3-201ENST00000339717 COQ9O75208 318 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 POGZQ7Z3K3 1410 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 STKLD1Q8NE28 680 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 PLEKHG4BQ96PX9 1271 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 CRNKL1Q9BZJ0 848 aaKnown RBP13.75□□□□□ -0.21
BRPF3-201ENST00000339717 PHACTR1Q9C0D0 580 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 ANKIB1Q9P2G1 1089 aa13.75□□□□□ -0.21
BRPF3-201ENST00000339717 POLR2EP19388 210 aaKnown RBP13.74□□□□□ -0.21
BRPF3-201ENST00000339717 USP4Q13107 963 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 POSTNQ15063 836 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
BRPF3-201ENST00000339717 USH1GQ495M9 461 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 TUBA3EQ6PEY2 450 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 CCNI2Q6ZMN8 369 aaPredicted RBP13.74□□□□□ -0.21
BRPF3-201ENST00000339717 RASSF3Q86WH2 238 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 TBC1D5Q92609 795 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 IQSEC3Q9UPP2 1182 aaPredicted RBP13.74□□□□□ -0.21
BRPF3-201ENST00000339717 AMOTL2Q9Y2J4 779 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 PAK1Q13153 545 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 LRGUKQ96M69 825 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 ZHX3Q9H4I2 956 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 CABP2Q9NPB3 220 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 OLFML3Q9NRN5 406 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 NFU1Q9UMS0 254 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 IGF2BP3O00425 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
BRPF3-201ENST00000339717 MAP2K7O14733 419 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 EVA1CP58658 441 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 RASGRF1Q13972 1273 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 TMTC3Q6ZXV5 915 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 CATSPER1Q8NEC5 780 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 KLHL25Q9H0H3 589 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 CTNND2Q9UQB3 1225 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 SUPT6HQ7KZ85 1726 aaKnown RBP13.74□□□□□ -0.21
BRPF3-201ENST00000339717 TBC1D12O60347 775 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 RPS6KB1P23443 525 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 UBA7P41226 1012 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 TLK2Q86UE8 772 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 KCTD17Q8N5Z5 321 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 WDR24Q96S15 920 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 CSRNP2Q9H175 543 aa13.74□□□□□ -0.21
BRPF3-201ENST00000339717 MAGOHP61326 146 aaKnown RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 TSHZ3Q63HK5 1081 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 MAB21L3Q8N8X9 362 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 MAGOHBQ96A72 148 aaKnown RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 CYTH2Q99418 400 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 PITPNM3Q9BZ71 974 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 RPAP3Q9H6T3 665 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 SOWAHDA6NJG2 315 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 ZBTB7BO15156 539 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 ARL1P40616 181 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 ANGPTL3Q9Y5C1 460 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 SRRM3A6NNA2 597 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 CMA1P23946 247 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 GRIK3Q13003 919 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 SPATA1Q5VX52 437 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 UBL4BQ8N7F7 174 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 TERB1Q8NA31 727 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 PDZD8Q8NEN9 1154 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 NOC4LQ9BVI4 516 aaKnown RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 USP15Q9Y4E8 981 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 APOA1P02647 267 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 UBTFL6P0CB48 400 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 RGS2P41220 211 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 MIS18BP1Q6P0N0 1132 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
BRPF3-201ENST00000339717 CCDC84Q86UT8 332 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 SYT2Q8N9I0 419 aaPredicted RBP13.73□□□□□ -0.21
BRPF3-201ENST00000339717 ZNF229Q9UJW7 825 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms