RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ABCB11O95342 1321 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 OAZ1P54368 228 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 FAM110CQ1W6H9 321 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 PIK3AP1Q6ZUJ8 805 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 MB21D1Q8N884 522 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 TAAR1Q96RJ0 339 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 ZFYVE28Q9HCC9 887 aa18.95■□□□□ 0.62
SHOX-201ENST00000334060 RBM27Q9P2N5 1060 aaKnown RBP18.95■□□□□ 0.62
SHOX-201ENST00000334060 ZSCAN22P10073 491 aaPredicted RBP18.94■□□□□ 0.62
SHOX-201ENST00000334060 FGD4Q96M96 766 aa18.94■□□□□ 0.62
SHOX-201ENST00000334060 SH3GLB2Q9NR46 395 aa18.94■□□□□ 0.62
SHOX-201ENST00000334060 CYP39A1Q9NYL5 469 aa18.94■□□□□ 0.62
SHOX-201ENST00000334060 ATP2B1P20020 1258 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 KRT2P35908 639 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 TRIM29Q14134 588 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 SYTL5Q8TDW5 730 aaPredicted RBP18.93■□□□□ 0.62
SHOX-201ENST00000334060 ACAD9Q9H845 621 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 MRPL11Q9Y3B7 192 aaKnown RBP18.93■□□□□ 0.62
SHOX-201ENST00000334060 MRVI1Q9Y6F6 885 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 ESYT2A0FGR8 921 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 F13A1P00488 732 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 GCLCP48506 637 aaPredicted RBP18.93■□□□□ 0.62
SHOX-201ENST00000334060 TOB1P50616 345 aaPredicted RBP18.93■□□□□ 0.62
SHOX-201ENST00000334060 GPR142Q7Z601 462 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 CUL5Q93034 780 aa18.93■□□□□ 0.62
SHOX-201ENST00000334060 RBBP6Q7Z6E9 1792 aaKnown RBP18.92■□□□□ 0.62
SHOX-201ENST00000334060 COBLO75128 1261 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 HSD17B4P51659 736 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 INF2Q27J81 1249 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 RNF207Q6ZRF8 634 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 CCDC148Q8NFR7 591 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 C6orf50Q9HD87 102 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 ZCCHC17Q9NP64 241 aaKnown RBP18.92■□□□□ 0.62
SHOX-201ENST00000334060 PLXNB2O15031 1838 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 FDX1P10109 184 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 U2AF2P26368 475 aaKnown RBP eCLIP18.92■□□□□ 0.62
SHOX-201ENST00000334060 PPP1R18Q6NYC8 613 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 REXO1Q8N1G1 1221 aaKnown RBP18.92■□□□□ 0.62
SHOX-201ENST00000334060 DAGLBQ8NCG7 672 aa18.92■□□□□ 0.62
SHOX-201ENST00000334060 hCG_1984214I3L0E3 225 aa18.91■□□□□ 0.62
SHOX-201ENST00000334060 PTGS1P23219 599 aa18.91■□□□□ 0.62
SHOX-201ENST00000334060 NOSTRINQ8IVI9 506 aa18.91■□□□□ 0.62
SHOX-201ENST00000334060 ANKRD35Q8N283 1001 aa18.91■□□□□ 0.62
SHOX-201ENST00000334060 ZNF713Q8N859 430 aaPredicted RBP18.91■□□□□ 0.62
SHOX-201ENST00000334060 CYP2W1Q8TAV3 490 aa18.91■□□□□ 0.62
SHOX-201ENST00000334060 GJA10Q969M2 543 aa18.91■□□□□ 0.62
SHOX-201ENST00000334060 TRIM47Q96LD4 638 aa18.91■□□□□ 0.62
SHOX-201ENST00000334060 SOWAHBA6NEL2 793 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 GCOM1H8Y6P7 765 aaPredicted RBP18.9■□□□□ 0.62
SHOX-201ENST00000334060 POLR2MP0CAP2 368 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 EIF2AK2P19525 551 aaKnown RBP18.9■□□□□ 0.62
SHOX-201ENST00000334060 PDCP20941 246 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 CEBPZQ03701 1054 aaKnown RBP18.9■□□□□ 0.62
SHOX-201ENST00000334060 ANO3Q9BYT9 981 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 XBP1P17861 261 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 ADORA2AP29274 412 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 TBCKQ8TEA7 893 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 GDPD2Q9HCC8 539 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 TFIP11Q9UBB9 837 aaKnown RBP18.9■□□□□ 0.62
SHOX-201ENST00000334060 GABRQQ9UN88 632 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 MYH7BA7E2Y1 1941 aa18.9■□□□□ 0.62
SHOX-201ENST00000334060 DNM1Q05193 864 aaKnown RBP18.89■□□□□ 0.61
SHOX-201ENST00000334060 CHST13Q8NET6 341 aa18.89■□□□□ 0.61
SHOX-201ENST00000334060 CD99L2Q8TCZ2 262 aa18.89■□□□□ 0.61
SHOX-201ENST00000334060 TNPO1Q92973 898 aaKnown RBP18.89■□□□□ 0.61
SHOX-201ENST00000334060 MMP19Q99542 508 aa18.89■□□□□ 0.61
SHOX-201ENST00000334060 CHMP5Q9NZZ3 219 aa18.89■□□□□ 0.61
SHOX-201ENST00000334060 KIF3AQ9Y496 699 aa18.89■□□□□ 0.61
SHOX-201ENST00000334060 PIK3CDO00329 1044 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 TDP2O95551 362 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 GNA11P29992 359 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 LACTBP83111 547 aaPredicted RBP18.88■□□□□ 0.61
SHOX-201ENST00000334060 NPLOC4Q8TAT6 608 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 CCDC12Q8WUD4 166 aaPredicted RBP18.88■□□□□ 0.61
SHOX-201ENST00000334060 PCDHB6Q9Y5E3 794 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 ZNFX1Q9P2E3 1918 aaKnown RBP18.88■□□□□ 0.61
SHOX-201ENST00000334060 SLC25A27O95847 323 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 ALDH1A1P00352 501 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 MRPL12P52815 198 aaKnown RBP18.88■□□□□ 0.61
SHOX-201ENST00000334060 GNL2Q13823 731 aaKnown RBP18.88■□□□□ 0.61
SHOX-201ENST00000334060 CCL14Q16627 93 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 ZNF296Q8WUU4 475 aaPredicted RBP18.88■□□□□ 0.61
SHOX-201ENST00000334060 CRYGNQ8WXF5 182 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 FOXP1Q9H334 677 aaPredicted RBP18.88■□□□□ 0.61
SHOX-201ENST00000334060 WBP1LQ9NX94 342 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 FLRT1Q9NZU1 646 aa18.88■□□□□ 0.61
SHOX-201ENST00000334060 DNAJC25-GNG10A0A024R161 153 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 GPR25O00155 361 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 PSMC4P43686 418 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 GHRHRQ02643 423 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 TMEM63BQ5T3F8 832 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 MYSM1Q5VVJ2 828 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 USP28Q96RU2 1077 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 RTEL1Q9NZ71 1219 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 CLIC4Q9Y696 253 aa18.87■□□□□ 0.61
SHOX-201ENST00000334060 PTPREP23469 700 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 SAFBQ15424 915 aaKnown RBP eCLIP18.86■□□□□ 0.61
SHOX-201ENST00000334060 TKFCQ3LXA3 575 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 PLEKHH3Q7Z736 793 aa18.86■□□□□ 0.61
SHOX-201ENST00000334060 FAM133AQ8N9E0 248 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms