RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 WDR24Q96S15 920 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ECT2Q9H8V3 914 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 CLIC4Q9Y696 253 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 SLC4A4Q9Y6R1 1079 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 MON2Q7Z3U7 1717 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 GRID2IPA4D2P6 1211 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 DHX9Q08211 1270 aaKnown RBP7.7□□□□□ -1.18
SMC1A-201ENST00000322213 ARID5BQ14865 1188 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 RESP18Q5W5W9 173 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 LINS1Q8NG48 757 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 TMEM60Q9H2L4 133 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 PALMDQ9NP74 551 aa7.7□□□□□ -1.18
SMC1A-201ENST00000322213 SLX4Q8IY92 1834 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 FAM13AO94988 1023 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 RXRAP19793 462 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 SF3A3Q12874 501 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 SLC39A14Q15043 492 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 ZNF174Q15697 407 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 MPRIPQ6WCQ1 1025 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 CD2APQ9Y5K6 639 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 MAN1A2O60476 641 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 HNRNPCL1O60812 293 aaKnown RBP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 BAG3O95817 575 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 PAX7P23759 505 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 CCDC144BQ3MJ40 725 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 TTLL7Q6ZT98 887 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 C6orf50Q9HD87 102 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 PA2G4Q9UQ80 394 aaKnown RBP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 RASGRF2O14827 1237 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 BUB1O43683 1085 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 EHHADHQ08426 723 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 ARMCX5Q6P1M9 558 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 BBOF1Q8ND07 529 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 MORC4Q8TE76 937 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 VCPKMTQ9H867 229 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 PREX1Q8TCU6 1659 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 ARHGAP10A1A4S6 786 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 XRCC5P13010 732 aaKnown RBP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 CEP70Q8NHQ1 597 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 B4GALNT2Q8NHY0 566 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 RCOR1Q9UKL0 485 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 NRKQ7Z2Y5 1582 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 HOXB7P09629 217 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 NAA30Q147X3 362 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 LIN9Q5TKA1 542 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 KBTBD3Q8NAB2 608 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 CCDC85AQ96PX6 553 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 ZDHHC9Q9Y397 364 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 UBN2Q6ZU65 1347 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 DEPDC5O75140 1603 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 HOXA7P31268 230 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 IFNAR2P48551 515 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 RASSF7Q02833 373 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 KRT40Q6A162 431 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 CCT8L2Q96SF2 557 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 LSM14BQ9BX40 385 aaKnown RBP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 SATB2Q9UPW6 733 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 SMTNP53814 917 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 NR1H3Q13133 447 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 TNNI3KQ59H18 835 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 MAGEB6Q8N7X4 407 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 NEK9Q8TD19 979 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.69□□□□□ -1.185e-7■■□□□ 12.9
SMC1A-201ENST00000322213 FPGT-TNNI3KV9GXZ4 949 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 ATP10AO60312 1499 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 GTPBP6O43824 516 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-201ENST00000322213 PRR29P0C7W0 189 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 CXCR5P32302 372 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 DDIT3P35638 169 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 GUCY1A3Q02108 690 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 NUDCD1Q96RS6 583 aa7.69□□□□□ -1.18
SMC1A-201ENST00000322213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.68□□□□□ -1.184e-6■■□□□ 14.1
SMC1A-201ENST00000322213 DISP1Q96F81 1524 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 TMCC1O94876 653 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 PARP1P09874 1014 aaKnown RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 GOLGA8FQ08AF8 430 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 GOLGA8DPQ0D2H9 430 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 IMPG2Q9BZV3 1241 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 KIAA1217Q5T5P2 1943 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 KDM3AQ9Y4C1 1321 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 PTH1RQ03431 593 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CCDC93Q567U6 631 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 PIP4K2CQ8TBX8 421 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CHMP6Q96FZ7 201 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 DYDC2Q96IM9 177 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 ANKRD65E5RJM6 399 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 TRIM42Q8IWZ5 723 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 OGFOD1Q8N543 542 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CXorf38Q8TB03 319 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 STAMBPL1Q96FJ0 436 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 FOXP1Q9H334 677 aaPredicted RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 A0A0D9SFI3 127 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CCZ1BP86790 482 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CCZ1P86791 482 aaPredicted RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 MKRN3Q13064 507 aaKnown RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 TBC1D1Q86TI0 1168 aaPredicted RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 CUEDC2Q9H467 287 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 HAUS2Q9NVX0 235 aa7.68□□□□□ -1.18
SMC1A-201ENST00000322213 XRN1Q8IZH2 1706 aaKnown RBP7.68□□□□□ -1.18
SMC1A-201ENST00000322213 RIMS1Q86UR5 1692 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms