RNA–Protein interactions for RNA: ENST00000320188.9

SWI5-201, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SWI5, Length 980 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-201ENST00000320188 COL4A4P53420 1690 aaPredicted RBP21.29■■□□□ 1
SWI5-201ENST00000320188 PATL2C9JE40 543 aaKnown RBP21.29■■□□□ 1
SWI5-201ENST00000320188 SMARCA5O60264 1052 aaPredicted RBP21.29■■□□□ 1
SWI5-201ENST00000320188 POU3F3P20264 500 aaPredicted RBP21.29■■□□□ 1
SWI5-201ENST00000320188 PTGS1P23219 599 aa21.29■■□□□ 1
SWI5-201ENST00000320188 MCCP23508 829 aa21.29■■□□□ 1
SWI5-201ENST00000320188 RFC2P35250 354 aa21.29■■□□□ 1
SWI5-201ENST00000320188 TFAP4Q01664 338 aa21.29■■□□□ 1
SWI5-201ENST00000320188 DUSP28Q4G0W2 176 aa21.29■■□□□ 1
SWI5-201ENST00000320188 BRDTQ58F21 947 aaPredicted RBP21.29■■□□□ 1
SWI5-201ENST00000320188 IFNL3Q8IZI9 196 aa21.29■■□□□ 1
SWI5-201ENST00000320188 TRMT13Q9NUP7 481 aaKnown RBP21.29■■□□□ 1
SWI5-201ENST00000320188 ADD3Q9UEY8 706 aaKnown RBP21.29■■□□□ 1
SWI5-201ENST00000320188 MTCH2Q9Y6C9 303 aa21.29■■□□□ 1
SWI5-201ENST00000320188 RAD50Q92878 1312 aa21.29■■□□□ 1
SWI5-201ENST00000320188 CYP2C9P11712 490 aa21.28■■□□□ 1
SWI5-201ENST00000320188 CHMP4CQ96CF2 233 aa21.28■■□□□ 1
SWI5-201ENST00000320188 NAPBQ9H115 298 aa21.28■■□□□ 1
SWI5-201ENST00000320188 STX8Q9UNK0 236 aa21.28■■□□□ 1
SWI5-201ENST00000320188 TET1Q8NFU7 2136 aa21.28■■□□□ 1
SWI5-201ENST00000320188 KIF28PB7ZC32 967 aa21.27■■□□□ 1
SWI5-201ENST00000320188 M0R2C6 588 aa21.27■■□□□ 1
SWI5-201ENST00000320188 MYL3P08590 195 aa21.27■■□□□ 1
SWI5-201ENST00000320188 MUM1L1Q5H9M0 696 aa21.27■■□□□ 1
SWI5-201ENST00000320188 FAM47CQ5HY64 1035 aa21.27■■□□□ 1
SWI5-201ENST00000320188 RCSD1Q6JBY9 416 aa21.27■■□□□ 1
SWI5-201ENST00000320188 KCTD1Q719H9 257 aa21.27■■□□□ 1
SWI5-201ENST00000320188 RETREG2Q8NC44 543 aa21.27■■□□□ 1
SWI5-201ENST00000320188 PHOSPHO2Q8TCD6 241 aa21.27■■□□□ 1
SWI5-201ENST00000320188 MORC4Q8TE76 937 aa21.27■■□□□ 1
SWI5-201ENST00000320188 MTG1Q9BT17 334 aaPredicted RBP21.27■■□□□ 1
SWI5-201ENST00000320188 WDR11Q9BZH6 1224 aa21.27■■□□□ 1
SWI5-201ENST00000320188 CERS4Q9HA82 394 aa21.27■■□□□ 1
SWI5-201ENST00000320188 PRR12Q9ULL5 1215 aa21.27■■□□□ 1
SWI5-201ENST00000320188 DDX49Q9Y6V7 483 aaKnown RBP21.27■■□□□ 1
SWI5-201ENST00000320188 BRWD1Q9NSI6 2320 aa21.27■□□□□ 0.99
SWI5-201ENST00000320188 LOC102724159A0A0B4J2E5 919 aa21.26■□□□□ 0.99
SWI5-201ENST00000320188 TSPY2A6NKD2 308 aa21.26■□□□□ 0.99
SWI5-201ENST00000320188 PURAQ00577 322 aaKnown RBP21.26■□□□□ 0.99
SWI5-201ENST00000320188 PPARAQ07869 468 aa21.26■□□□□ 0.99
SWI5-201ENST00000320188 PWP2Q15269 919 aaKnown RBP21.26■□□□□ 0.99
SWI5-201ENST00000320188 OR6J1Q8NGC5 347 aa21.26■□□□□ 0.99
SWI5-201ENST00000320188 VWCEQ96DN2 955 aa21.26■□□□□ 0.99
SWI5-201ENST00000320188 ARIH1Q9Y4X5 557 aaPredicted RBP21.26■□□□□ 0.99
SWI5-201ENST00000320188 PTPRSQ13332 1948 aa21.25■□□□□ 0.99
SWI5-201ENST00000320188 RFXAPO00287 272 aa21.25■□□□□ 0.99
SWI5-201ENST00000320188 ICAM1P05362 532 aa21.25■□□□□ 0.99
SWI5-201ENST00000320188 ALDH5A1P51649 535 aaPredicted RBP21.25■□□□□ 0.99
SWI5-201ENST00000320188 SNAP25P60880 206 aa21.25■□□□□ 0.99
SWI5-201ENST00000320188 CCDC96Q2M329 555 aa21.25■□□□□ 0.99
SWI5-201ENST00000320188 ARNTL2Q8WYA1 636 aa21.25■□□□□ 0.99
SWI5-201ENST00000320188 MPHOSPH6Q99547 160 aaKnown RBP21.25■□□□□ 0.99
SWI5-201ENST00000320188 FTOQ9C0B1 505 aaKnown RBP eCLIP21.25■□□□□ 0.99
SWI5-201ENST00000320188 PITPNM1O00562 1244 aa21.24■□□□□ 0.99
SWI5-201ENST00000320188 TMEM63BQ5T3F8 832 aa21.24■□□□□ 0.99
SWI5-201ENST00000320188 HLA-CQ95604 372 aa21.24■□□□□ 0.99
SWI5-201ENST00000320188 NOD1Q9Y239 953 aa21.24■□□□□ 0.99
SWI5-201ENST00000320188 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
SWI5-201ENST00000320188 KPNA6O60684 536 aa21.23■□□□□ 0.99
SWI5-201ENST00000320188 HOXD11P31277 338 aaPredicted RBP21.23■□□□□ 0.99
SWI5-201ENST00000320188 BFSP2Q13515 415 aa21.23■□□□□ 0.99
SWI5-201ENST00000320188 PPP2R5BQ15173 497 aa21.23■□□□□ 0.99
SWI5-201ENST00000320188 TMEM31Q5JXX7 168 aa21.23■□□□□ 0.99
SWI5-201ENST00000320188 NFRKBQ6P4R8 1299 aa21.23■□□□□ 0.99
SWI5-201ENST00000320188 HERC6Q8IVU3 1022 aa21.23■□□□□ 0.99
SWI5-201ENST00000320188 MTMR7Q9Y216 660 aa21.23■□□□□ 0.99
SWI5-201ENST00000320188 PTPDC1A2A3K4 754 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 EPOPA6NHQ4 379 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 BAIAP3O94812 1187 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 KCNJ6P48051 423 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 TAP1Q03518 808 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 BAATQ14032 418 aaPredicted RBP21.22■□□□□ 0.99
SWI5-201ENST00000320188 NBPF20Q3BBV1 942 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 TSHZ3Q63HK5 1081 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 CCDC155Q8N6L0 562 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 DCAF4Q8WV16 495 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 PURBQ96QR8 312 aaKnown RBP21.22■□□□□ 0.99
SWI5-201ENST00000320188 LRFN3Q9BTN0 628 aa21.22■□□□□ 0.99
SWI5-201ENST00000320188 IQCF3P0C7M6 154 aa21.21■□□□□ 0.99
SWI5-201ENST00000320188 PTPN11Q06124 597 aaPredicted RBP21.21■□□□□ 0.99
SWI5-201ENST00000320188 RANBP17Q9H2T7 1088 aaKnown RBP21.21■□□□□ 0.99
SWI5-201ENST00000320188 EPHX3Q9H6B9 360 aa21.21■□□□□ 0.99
SWI5-201ENST00000320188 PNMA2Q9UL42 364 aa21.21■□□□□ 0.99
SWI5-201ENST00000320188 SIP14410 1827 aa21.2■□□□□ 0.98
SWI5-201ENST00000320188 RBM47A0AV96 593 aaKnown RBP21.2■□□□□ 0.98
SWI5-201ENST00000320188 TLL1O43897 1013 aa21.2■□□□□ 0.98
SWI5-201ENST00000320188 PDE4DQ08499 809 aa21.2■□□□□ 0.98
SWI5-201ENST00000320188 KRT40Q6A162 431 aa21.2■□□□□ 0.98
SWI5-201ENST00000320188 FSD1Q9BTV5 496 aa21.2■□□□□ 0.98
SWI5-201ENST00000320188 B4DLN1 442 aa21.19■□□□□ 0.98
SWI5-201ENST00000320188 NFIBO00712 420 aa21.19■□□□□ 0.98
SWI5-201ENST00000320188 MRPL12P52815 198 aaKnown RBP21.19■□□□□ 0.98
SWI5-201ENST00000320188 GRB10Q13322 594 aa21.19■□□□□ 0.98
SWI5-201ENST00000320188 SYDE2Q5VT97 1194 aa21.19■□□□□ 0.98
SWI5-201ENST00000320188 RASGRP2Q7LDG7 609 aa21.19■□□□□ 0.98
SWI5-201ENST00000320188 SCFD2Q8WU76 684 aa21.19■□□□□ 0.98
SWI5-201ENST00000320188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.19■□□□□ 0.98
SWI5-201ENST00000320188 MYH6P13533 1939 aa21.18■□□□□ 0.98
SWI5-201ENST00000320188 KIAA1217Q5T5P2 1943 aa21.18■□□□□ 0.98
SWI5-201ENST00000320188 RANBP6O60518 1105 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms