RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 PFASO15067 1338 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 SLC15A5A6NIM6 579 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 GCOM1H8Y6P7 765 aaPredicted RBP14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 M0R2N6 131 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 MMP1P03956 469 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 POLR2MP0CAP2 368 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 FCER1AP12319 257 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 CALML3P27482 149 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 GNA11P29992 359 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 PSMC4P43686 418 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 CLK2P49760 499 aaKnown RBP14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 ADCY7P51828 1080 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 MRPL12P52815 198 aaKnown RBP14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 FCGRTP55899 365 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 NLRP5P59047 1200 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 KCTD2Q14681 263 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 WDR78Q5VTH9 848 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 LARP1BQ659C4 914 aaKnown RBP14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 USP17L6PQ6QN14 398 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 NSMFQ6X4W1 530 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 SLC30A10Q6XR72 485 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 RNF207Q6ZRF8 634 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 SPRYD3Q8NCJ5 442 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 SYTL5Q8TDW5 730 aaPredicted RBP14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 CUL5Q93034 780 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 MMP19Q99542 508 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 C6orf50Q9HD87 102 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 COL20A1Q9P218 1284 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 GJD2Q9UKL4 321 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 PCDHA4Q9UN74 947 aa14.53□□□□□ -0.08
CHMP2A-201ENST00000312547 TNPO2O14787 897 aaKnown RBP14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 COBLO75128 1261 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 CFBP00751 764 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 PDCP20941 246 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 ADORA2AP29274 412 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 FOSBP53539 338 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 TRIM29Q14134 588 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 KIF22Q14807 665 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 ANKRD35Q8N283 1001 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 FAM133AQ8N9E0 248 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 CD99L2Q8TCZ2 262 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 BICD2Q8TD16 824 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 ERO1AQ96HE7 468 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 ABHD8Q96I13 439 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 FGD4Q96M96 766 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 CWC22Q9HCG8 908 aaKnown RBP14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 IVNS1ABPQ9Y6Y0 642 aa14.52□□□□□ -0.09
CHMP2A-201ENST00000312547 SMCHD1A6NHR9 2005 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 HOXC6P09630 235 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 SYT1P21579 422 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 HOXA13P31271 388 aaPredicted RBP14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 GUCY1B3Q02153 619 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 UBE2SQ16763 222 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 ZNF792Q3KQV3 632 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 BLIDQ8IZY5 108 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 OXER1Q8TDS5 423 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 SOCS4Q8WXH5 440 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 TNFRSF25Q93038 417 aa14.51□□□□□ -0.09
CHMP2A-201ENST00000312547 ASTN1O14525 1302 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 SOWAHBA6NEL2 793 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 POTEB2H3BUK9 544 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 ECM2O94769 699 aaPredicted RBP14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 GNRH1P01148 92 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 PGK2P07205 417 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 DDIT3P35638 169 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 KRT2P35908 639 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 CNTN2Q02246 1040 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 MAP2K5Q13163 448 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 AP3B2Q13367 1082 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 DIS3L2Q8IYB7 885 aaKnown RBP14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 REXO1Q8N1G1 1221 aaKnown RBP14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 PURBQ96QR8 312 aaKnown RBP14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 TMEM260Q9NX78 707 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 BIN2Q9UBW5 565 aaPredicted RBP14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 PCDHA6Q9UN73 950 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 DIS3Q9Y2L1 958 aaKnown RBP14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 PCDHA8Q9Y5H6 950 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 ZNF236Q9UL36 1845 aa14.5□□□□□ -0.09
CHMP2A-201ENST00000312547 FRMPD4Q14CM0 1322 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 RPTORQ8N122 1335 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 BTBD18B2RXH4 712 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 FOSP01100 380 aaPredicted RBP14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 IGHA2P01877 340 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 PDIA4P13667 645 aaKnown RBP14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 MCTP2Q6DN12 878 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 RASGRP4Q8TDF6 673 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 IPO9Q96P70 1041 aaKnown RBP14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 TAAR1Q96RJ0 339 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 NUDT12Q9BQG2 462 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 BRMS1Q9HCU9 246 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 SRRDQ9UH36 339 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 MTMR6Q9Y217 621 aa14.49□□□□□ -0.09
CHMP2A-201ENST00000312547 LOC102724159A0A0B4J2E5 919 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 H3BQV1 296 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 STX6O43752 255 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 U2AF2P26368 475 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 RGS2P41220 211 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 FLT3LGP49771 235 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 PRKCZQ05513 592 aa14.48□□□□□ -0.09
CHMP2A-201ENST00000312547 NR5A1Q13285 461 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms