RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 SMC2O95347 1197 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 ASNSP08243 561 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 STAT6P42226 847 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 MYL5Q02045 173 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 DPYDQ12882 1025 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 VCPKMTQ9H867 229 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 SPON1Q9HCB6 807 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 DISC1Q9NRI5 854 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 SYNPO2Q9UMS6 1093 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 ATP1A3P13637 1013 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 CALCRLQ16602 461 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 KIFC2Q96AC6 838 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 UIMC1Q96RL1 719 aa25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 FHDC1Q9C0D6 1143 aaPredicted RBP25.37■■□□□ 1.65
PDLIM2-202ENST00000308354 MEIS2O14770 477 aa25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 NBPF12Q5TAG4 269 aaPredicted RBP25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 GJA10Q969M2 543 aa25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 P2RX7Q99572 595 aaKnown RBP25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 MMP14P50281 582 aa25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 CUL4BQ13620 913 aa25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 NAALADL2Q58DX5 795 aa25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 LRRC15Q8TF66 581 aa25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 MTMR9Q96QG7 549 aa25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 ZNF341Q9BYN7 854 aa25.36■■□□□ 1.65
PDLIM2-202ENST00000308354 RRAGBQ5VZM2 374 aa25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 LRRC8AQ8IWT6 810 aa25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 TRPM4Q8TD43 1214 aa25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 FBXO28Q9NVF7 368 aa25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 FZD1Q9UP38 647 aa25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 DGKZQ13574 1117 aa25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 ANGEL2Q5VTE6 544 aaKnown RBP25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 CCDC174Q6PII3 467 aa25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 SMYD4Q8IYR2 804 aaPredicted RBP25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 FEZ1Q99689 392 aa25.35■■□□□ 1.65
PDLIM2-202ENST00000308354 H7C1D1 291 aa25.34■■□□□ 1.65
PDLIM2-202ENST00000308354 FMR1Q06787 632 aaKnown RBP eCLIP25.34■■□□□ 1.65
PDLIM2-202ENST00000308354 CABP7Q86V35 215 aa25.34■■□□□ 1.65
PDLIM2-202ENST00000308354 ANO3Q9BYT9 981 aa25.34■■□□□ 1.65
PDLIM2-202ENST00000308354 CCSER1Q9C0I3 900 aa25.34■■□□□ 1.65
PDLIM2-202ENST00000308354 HOXA13P31271 388 aaPredicted RBP25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 FANCCQ00597 558 aa25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 TRMT44Q8IYL2 757 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 PYM1Q9BRP8 204 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 DDX25Q9UHL0 483 aaKnown RBP25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 OPLAHO14841 1288 aa25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 PRKCSHP14314 528 aaPredicted RBP25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 HSP90AA4PQ58FG1 418 aa25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 TRIML1Q8N9V2 468 aa25.33■■□□□ 1.65
PDLIM2-202ENST00000308354 SMCHD1A6NHR9 2005 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 INPP5BP32019 993 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 ORC2Q13416 577 aaPredicted RBP25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 PPP4R3AQ6IN85 833 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 MLKLQ8NB16 471 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 AK8Q96MA6 479 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 SH2D4AQ9H788 454 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 MYH7BA7E2Y1 1941 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 PLCG1P19174 1290 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 LMNB1P20700 586 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 TERF1P54274 439 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 IGSF22Q8N9C0 903 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 GSDMAQ96QA5 445 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 GLT8D2Q9H1C3 349 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 FANCLQ9NW38 375 aa25.32■■□□□ 1.64
PDLIM2-202ENST00000308354 POTEMA6NI47 508 aa25.31■■□□□ 1.64
PDLIM2-202ENST00000308354 EPS15P42566 896 aa25.31■■□□□ 1.64
PDLIM2-202ENST00000308354 MMTAG2Q9BU76 263 aaKnown RBP25.31■■□□□ 1.64
PDLIM2-202ENST00000308354 CD44P16070 742 aaKnown RBP25.31■■□□□ 1.64
PDLIM2-202ENST00000308354 KLHL10Q6JEL2 608 aa25.31■■□□□ 1.64
PDLIM2-202ENST00000308354 MED15Q96RN5 788 aa25.31■■□□□ 1.64
PDLIM2-202ENST00000308354 GPRC5DQ9NZD1 345 aa25.31■■□□□ 1.64
PDLIM2-202ENST00000308354 GTPBP6O43824 516 aaPredicted RBP25.3■■□□□ 1.64
PDLIM2-202ENST00000308354 TMC6Q7Z403 805 aa25.3■■□□□ 1.64
PDLIM2-202ENST00000308354 CHURC1Q8WUH1 139 aa25.3■■□□□ 1.64
PDLIM2-202ENST00000308354 HAS1Q92839 578 aa25.3■■□□□ 1.64
PDLIM2-202ENST00000308354 LRWD1Q9UFC0 647 aa25.3■■□□□ 1.64
PDLIM2-202ENST00000308354 TPM2P07951 284 aa25.29■■□□□ 1.64
PDLIM2-202ENST00000308354 TBC1D5Q92609 795 aa25.29■■□□□ 1.64
PDLIM2-202ENST00000308354 MARCH6O60337 910 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 FXR2P51116 673 aaKnown RBP eCLIP25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 HIRAP54198 1017 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 GPC2Q8N158 579 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 GGA3Q9NZ52 723 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 IMPACTQ9P2X3 320 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 DACH1Q9UI36 760 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 SPDYE3A6NKU9 549 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 CTNND1O60716 968 aaKnown RBP25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 SERPINC1P01008 464 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 TMEM266Q2M3C6 531 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 FCHSD1Q86WN1 690 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 ZKSCAN4Q969J2 545 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 NUDT12Q9BQG2 462 aa25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 RANBP17Q9H2T7 1088 aaKnown RBP25.28■■□□□ 1.64
PDLIM2-202ENST00000308354 ATAD5Q96QE3 1844 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 STX17P56962 302 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 UBASH3AP57075 661 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 GSDMDP57764 484 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 CCZ1BP86790 482 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 CCZ1P86791 482 aaPredicted RBP25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 ARHGAP4P98171 946 aa25.27■■□□□ 1.64
PDLIM2-202ENST00000308354 AP3B2Q13367 1082 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms