RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 KIF22Q14807 665 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 ANKS1AQ92625 1134 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 HOXC10Q9NYD6 342 aa12.3□□□□□ -0.44
VWA3A-201ENST00000299840 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 PRMT2P55345 433 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 PDCD2Q16342 344 aaPredicted RBP12.29□□□□□ -0.44
VWA3A-201ENST00000299840 RRP12Q5JTH9 1297 aaKnown RBP12.29□□□□□ -0.44
VWA3A-201ENST00000299840 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 GIMAP7Q8NHV1 300 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 GOLGA5Q8TBA6 731 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 RBPJLQ9UBG7 517 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 ADAMTS5Q9UNA0 930 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 RABGAP1Q9Y3P9 1069 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 RBM47A0AV96 593 aaKnown RBP12.29□□□□□ -0.44
VWA3A-201ENST00000299840 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
VWA3A-201ENST00000299840 NDUFB10O96000 172 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 DSG3P32926 999 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 RPS6KA3P51812 740 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 CAP1Q01518 475 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 NECTIN1Q15223 517 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 ZSCAN23Q3MJ62 389 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 POTEEQ6S8J3 1075 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 OTOP1Q7RTM1 612 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 NKX2-3Q8TAU0 364 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 KIF2CQ99661 725 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 LZTS2Q9BRK4 669 aa12.29□□□□□ -0.44
VWA3A-201ENST00000299840 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 SPDYE16A6NNV3 312 aaPredicted RBP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 EPB41L2O43491 1005 aaKnown RBP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 NMT2O60551 498 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 DDIT3P35638 169 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 DGKHQ86XP1 1220 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 GMCL1Q96IK5 515 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 FRMD4BQ9Y2L6 1034 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 PLA2G6O60733 806 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 CNMDO75829 334 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 CTGFP29279 349 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 NUCB2P80303 420 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 C17orf53Q8N3J3 647 aaPredicted RBP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 ANKRD13CQ8N6S4 541 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 MB21D1Q8N884 522 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 CXorf38Q8TB03 319 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 MCOLN1Q9GZU1 580 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 ZSWIM5Q9P217 1185 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 BIN2Q9UBW5 565 aaPredicted RBP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 BLOC1S6Q9UL45 172 aa12.28□□□□□ -0.44
VWA3A-201ENST00000299840 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.28□□□□□ -0.44
VWA3A-201ENST00000299840 B4E1Z4 1266 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 FCGRTP55899 365 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 KMT5BQ4FZB7 885 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 SLFN13Q68D06 897 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.45
VWA3A-201ENST00000299840 SPICE1Q8N0Z3 855 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 GPRC5AQ8NFJ5 357 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 ZNF483Q8TF39 744 aaPredicted RBP12.27□□□□□ -0.45
VWA3A-201ENST00000299840 TANGO6Q9C0B7 1094 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 ANO2Q9NQ90 1003 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 SPATS2LQ9NUQ6 558 aaKnown RBP12.27□□□□□ -0.45
VWA3A-201ENST00000299840 E7EWF7 191 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 SMAPO00193 183 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 CPP00450 1065 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 HOXD10P28358 340 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 PSMC4P43686 418 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 ERVK-9P63128 1117 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 ERVK-24P63145 666 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 GRIK3Q13003 919 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 SLC5A9Q2M3M2 681 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 FAM83BQ5T0W9 1011 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 IQCA1Q86XH1 822 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 TNS4Q8IZW8 715 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 LRRC47Q8N1G4 583 aaKnown RBP12.27□□□□□ -0.45
VWA3A-201ENST00000299840 TRIM47Q96LD4 638 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 TMEM47Q9BQJ4 181 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.45
VWA3A-201ENST00000299840 TXNRD2Q9NNW7 524 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 STX8Q9UNK0 236 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 PTPN22Q9Y2R2 807 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 TRIM17Q9Y577 477 aa12.27□□□□□ -0.45
VWA3A-201ENST00000299840 SLC27A2O14975 620 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 CDKL5O76039 1030 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 TPM4P67936 248 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 RBBP5Q15291 538 aaKnown RBP12.26□□□□□ -0.45
VWA3A-201ENST00000299840 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 STOX1Q6ZVD7 989 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 NCAPG2Q86XI2 1143 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 DRAXINQ8NBI3 349 aaPredicted RBP12.26□□□□□ -0.45
VWA3A-201ENST00000299840 NCOA7Q8NI08 942 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 DCAF4Q8WV16 495 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 ZSCAN10Q96SZ4 725 aaPredicted RBP12.26□□□□□ -0.45
VWA3A-201ENST00000299840 SLX1AQ9BQ83 275 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 ARHGAP39Q9C0H5 1083 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 PPP1R9AQ9ULJ8 1098 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 ZNF236Q9UL36 1845 aa12.26□□□□□ -0.45
VWA3A-201ENST00000299840 TMCO5BA8MYB1 307 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms