RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 CALML3P27482 149 aa16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 MRPL12P52815 198 aaKnown RBP16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 RPS6P62753 249 aaKnown RBP16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 TRDNQ13061 729 aa16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 SHHQ15465 462 aa16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 FSCN1Q16658 493 aaKnown RBP16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 DNERQ8NFT8 737 aa16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
TMEM41B-201ENST00000299596 PARP1P09874 1014 aaKnown RBP16.22■□□□□ 0.19
TMEM41B-201ENST00000299596 BEX3Q00994 111 aa16.22■□□□□ 0.19
TMEM41B-201ENST00000299596 IFIT1BQ5T764 474 aaKnown RBP16.22■□□□□ 0.19
TMEM41B-201ENST00000299596 FAM109BQ6ICB4 259 aaPredicted RBP16.22■□□□□ 0.19
TMEM41B-201ENST00000299596 SLC30A10Q6XR72 485 aa16.22■□□□□ 0.19
TMEM41B-201ENST00000299596 ADGRF4Q8IZF3 695 aa16.22■□□□□ 0.19
TMEM41B-201ENST00000299596 SEZ6LQ9BYH1 1024 aa16.22■□□□□ 0.19
TMEM41B-201ENST00000299596 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 TIMP1P01033 207 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 FPGSQ05932 587 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 PDE4DQ08499 809 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 CDC37Q16543 378 aaPredicted RBP16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 USH1GQ495M9 461 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 DUSP28Q4G0W2 176 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 C9orf50Q5SZB4 431 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 CXCL17Q6UXB2 119 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 WDR11Q9BZH6 1224 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 CPVLQ9H3G5 476 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 TBX21Q9UL17 535 aa16.21■□□□□ 0.19
TMEM41B-201ENST00000299596 RBM47A0AV96 593 aaKnown RBP16.2■□□□□ 0.18
TMEM41B-201ENST00000299596 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
TMEM41B-201ENST00000299596 Q7L0L9 218 aa16.2■□□□□ 0.18
TMEM41B-201ENST00000299596 MTMR10Q9NXD2 777 aa16.2■□□□□ 0.18
TMEM41B-201ENST00000299596 ABCB11O95342 1321 aa16.2■□□□□ 0.18
TMEM41B-201ENST00000299596 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
TMEM41B-201ENST00000299596 MCM3APO60318 1980 aa16.2■□□□□ 0.18
TMEM41B-201ENST00000299596 LAMA4Q16363 1823 aa16.2■□□□□ 0.18
TMEM41B-201ENST00000299596 CYP21A2P08686 494 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 EDNRBP24530 442 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 PTH1RQ03431 593 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 SEC23AQ15436 765 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 MFSD5Q6N075 450 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 MCF2L2Q86YR7 1114 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 FAM126BQ8IXS8 530 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 SLC43A3Q8NBI5 491 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 JMJD4Q9H9V9 463 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 NKRFO15226 690 aaKnown RBP eCLIP16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 SGSM2O43147 1006 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 ITGA7Q13683 1181 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 QRICH1Q2TAL8 776 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 TMEM63BQ5T3F8 832 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 CYB5R4Q7L1T6 521 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 FBXO11Q86XK2 927 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 SCFD2Q8WU76 684 aa16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
TMEM41B-201ENST00000299596 COL6A3P12111 3177 aa16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 ERICH2A1L162 156 aa16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 CD4P01730 458 aa16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 PTGS1P23219 599 aa16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 CPT1AP50416 773 aa16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 EPHB4P54760 987 aa16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 SMAD3P84022 425 aaKnown RBP16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 BRDTQ58F21 947 aaPredicted RBP16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 RALYLQ86SE5 291 aaKnown RBP16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 POLR3EQ9NVU0 708 aa16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 STXBP5LQ9Y2K9 1186 aa16.18■□□□□ 0.18
TMEM41B-201ENST00000299596 KLRF2D3W0D1 207 aa16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 IFIT3O14879 490 aaKnown RBP16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 PPIGQ13427 754 aaKnown RBP eCLIP16.17■□□□□ 0.182e-7■■■■□ 19.7
TMEM41B-201ENST00000299596 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 TMEM199Q8N511 208 aa16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 NCOA7Q8NI08 942 aa16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 NSUN6Q8TEA1 469 aaKnown RBP16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 MAP4K1Q92918 833 aa16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 RNPC3Q96LT9 517 aaKnown RBP16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 AMNQ9BXJ7 453 aa16.17■□□□□ 0.18
TMEM41B-201ENST00000299596 GRIN2DO15399 1336 aa16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 PALM3A6NDB9 673 aaPredicted RBP16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 E7EWF7 191 aa16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 ZNF697Q5TEC3 545 aa16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 STAG2Q8N3U4 1231 aa16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 OR6J1Q8NGC5 347 aa16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 SYTL5Q8TDW5 730 aaPredicted RBP16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 TBC1D5Q92609 795 aa16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 IWS1Q96ST2 819 aa16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 MAD2L2Q9UI95 211 aa16.16■□□□□ 0.18
TMEM41B-201ENST00000299596 ZBTB5O15062 677 aa16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 KPNA6O60684 536 aa16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 TXNP10599 105 aaKnown RBP16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 TRAF1Q13077 416 aa16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 TTLL4Q14679 1199 aa16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 MTMR8Q96EF0 704 aa16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 TAAR1Q96RJ0 339 aa16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 RMDN3Q96TC7 470 aa16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 MAP3K20Q9NYL2 800 aaKnown RBP16.15■□□□□ 0.18
TMEM41B-201ENST00000299596 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
TMEM41B-201ENST00000299596 LCTP09848 1927 aa16.14■□□□□ 0.17
TMEM41B-201ENST00000299596 PSMC6P62333 389 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms