RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 PLCG1P19174 1290 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 NNTQ13423 1086 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 RNPC3Q96LT9 517 aaKnown RBP20.75■□□□□ 0.91
SSC4D-201ENST00000275560 CCDC43Q96MW1 224 aaKnown RBP20.75■□□□□ 0.91
SSC4D-201ENST00000275560 CYP19A1P11511 503 aaPredicted RBP20.75■□□□□ 0.91
SSC4D-201ENST00000275560 TRAPPC10P48553 1259 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 EPHB4P54760 987 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 CHRNDQ07001 517 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 C8orf74Q6P047 294 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 CCDC155Q8N6L0 562 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 PYM1Q9BRP8 204 aaKnown RBP20.75■□□□□ 0.91
SSC4D-201ENST00000275560 FAM107BQ9H098 131 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 MMRN2Q9H8L6 949 aa20.75■□□□□ 0.91
SSC4D-201ENST00000275560 OPA1O60313 960 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 KCNB1Q14721 858 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 ARL6IP4Q66PJ3 421 aaKnown RBP20.74■□□□□ 0.91
SSC4D-201ENST00000275560 MTMR8Q96EF0 704 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 KBTBD4Q9NVX7 518 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 CICQ96RK0 1608 aaPredicted RBP20.74■□□□□ 0.91
SSC4D-201ENST00000275560 AKR1B10O60218 316 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 DDAH1O94760 285 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 SEC24CP53992 1094 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 NAP1L1P55209 391 aaKnown RBP20.74■□□□□ 0.91
SSC4D-201ENST00000275560 ASIC1P78348 528 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 GFPT1Q06210 699 aaPredicted RBP20.74■□□□□ 0.91
SSC4D-201ENST00000275560 NUP58Q9BVL2 599 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 SLC39A2Q9NP94 309 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 PLCH1Q4KWH8 1693 aa20.74■□□□□ 0.91
SSC4D-201ENST00000275560 USO1O60763 962 aaKnown RBP20.73■□□□□ 0.91
SSC4D-201ENST00000275560 CALM1P0DP23 149 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 CALM2P0DP24 149 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 CALM3P0DP25 149 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 RASSF7Q02833 373 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 RRAGAQ7L523 313 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
SSC4D-201ENST00000275560 NUP98P52948 1817 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 ZNF233A6NK53 670 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 CCNE1P24864 410 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 MYCBPQ99417 103 aaPredicted RBP20.73■□□□□ 0.91
SSC4D-201ENST00000275560 TLR10Q9BXR5 811 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 HYOU1Q9Y4L1 999 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 ARAP2Q8WZ64 1704 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 CCDC194A0A1B0GVG4 234 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 LRRC53A6NM62 1247 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 GBP6Q6ZN66 633 aa20.73■□□□□ 0.91
SSC4D-201ENST00000275560 PACSIN2Q9UNF0 486 aaPredicted RBP20.73■□□□□ 0.91
SSC4D-201ENST00000275560 COL1A1P02452 1464 aaPredicted RBP20.72■□□□□ 0.91
SSC4D-201ENST00000275560 COL4A1P02462 1669 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 GUCY2DQ02846 1103 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 TSGA10Q9BZW7 698 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 CPVLQ9H3G5 476 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 SEMA6BQ9H3T3 888 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 EPB41L5Q9HCM4 733 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 ZNF142P52746 1687 aaPredicted RBP20.72■□□□□ 0.91
SSC4D-201ENST00000275560 TXNRD1Q16881 649 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 PLAGL2Q9UPG8 496 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 JAG2Q9Y219 1238 aa20.72■□□□□ 0.91
SSC4D-201ENST00000275560 H0YHG0 523 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 SLC1A4P43007 532 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 MAGEA1P43355 309 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 RETREG2Q8NC44 543 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 DHTKD1Q96HY7 919 aaPredicted RBP20.71■□□□□ 0.91
SSC4D-201ENST00000275560 TRIM9Q9C026 710 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 SHANK3Q9BYB0 1731 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 EMBQ6PCB8 327 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 ZNF34Q8IZ26 560 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 PROCA1Q8NCQ7 364 aaPredicted RBP20.71■□□□□ 0.91
SSC4D-201ENST00000275560 KIAA0895Q8NCT3 520 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 PCDHA4Q9UN74 947 aa20.71■□□□□ 0.91
SSC4D-201ENST00000275560 IBSPP21815 317 aaPredicted RBP20.7■□□□□ 0.9
SSC4D-201ENST00000275560 IGHMBP2P38935 993 aaKnown RBP20.7■□□□□ 0.9
SSC4D-201ENST00000275560 SKOR1P84550 965 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 OTUD6BQ8N6M0 293 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 ERGIC2Q96RQ1 377 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 PCDHA6Q9UN73 950 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 PCDHA8Q9Y5H6 950 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 TSPY2A6NKD2 308 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 HEXIM1O94992 359 aaKnown RBP20.7■□□□□ 0.9
SSC4D-201ENST00000275560 FTCDO95954 541 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 LSP1P33241 339 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 PAFAH1B1P43034 410 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 SLC35G1Q2M3R5 365 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 KLHDC7AQ5VTJ3 777 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 CABP7Q86V35 215 aa20.7■□□□□ 0.9
SSC4D-201ENST00000275560 EVA1CP58658 441 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 RCSD1Q6JBY9 416 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 ZNF572Q7Z3I7 529 aaPredicted RBP20.69■□□□□ 0.9
SSC4D-201ENST00000275560 PIK3R5Q8WYR1 880 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 ALS2CR12Q96Q35 445 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 CEP89Q96ST8 783 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 SIK3Q9Y2K2 1263 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 COL5A2P05997 1499 aaPredicted RBP20.69■□□□□ 0.9
SSC4D-201ENST00000275560 FLT1P17948 1338 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 EPB41P11171 864 aaKnown RBP20.69■□□□□ 0.9
SSC4D-201ENST00000275560 TCP1P17987 556 aaKnown RBP20.69■□□□□ 0.9
SSC4D-201ENST00000275560 FNTAP49354 379 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 PTPROQ16827 1216 aa20.69■□□□□ 0.9
SSC4D-201ENST00000275560 SWT1Q5T5J6 900 aaKnown RBP20.69■□□□□ 0.9
SSC4D-201ENST00000275560 CFAP58Q5T655 872 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms