RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 SLC17A8Q8NDX2 589 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 NR1H4Q96RI1 486 aaPredicted RBP16.24■□□□□ 0.19
CCDC6-201ENST00000263102 ZNF148Q9UQR1 794 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 GNA14O95837 355 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 SRGAP2CP0DJJ0 459 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 LRCH2Q5VUJ6 765 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 PRIMPOLQ96LW4 560 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 LBHD1Q9BQE6 289 aaPredicted RBP16.24■□□□□ 0.19
CCDC6-201ENST00000263102 TSR3Q9UJK0 312 aaKnown RBP16.24■□□□□ 0.19
CCDC6-201ENST00000263102 TRIM35Q9UPQ4 493 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 EXOC8Q8IYI6 725 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 CDKL2Q92772 493 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 RPGRIP1Q96KN7 1286 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 KMT5AQ9NQR1 393 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 PTPN22Q9Y2R2 807 aa16.24■□□□□ 0.19
CCDC6-201ENST00000263102 NPR1P16066 1061 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 PCIF1Q9H4Z3 704 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 KLRF2D3W0D1 207 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 KCNK3O14649 394 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 MYL7Q01449 175 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 HDAC1Q13547 482 aaPredicted RBP16.23■□□□□ 0.19
CCDC6-201ENST00000263102 TTC31Q49AM3 519 aaPredicted RBP16.23■□□□□ 0.19
CCDC6-201ENST00000263102 FAM196AQ6ZSG2 479 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 GJA10Q969M2 543 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 N4BP1O75113 896 aaKnown RBP16.23■□□□□ 0.19
CCDC6-201ENST00000263102 SLC16A2P36021 539 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 ASPHQ12797 758 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 CACTINQ8WUQ7 758 aaKnown RBP16.23■□□□□ 0.19
CCDC6-201ENST00000263102 DPH5Q9H2P9 285 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 TTC4O95801 387 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 FANCCQ00597 558 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 CHRNDQ07001 517 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 PNOCQ13519 176 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 COA7Q96BR5 231 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 SERPINB2P05120 415 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 BLVRAP53004 296 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 EFCAB13Q8IY85 973 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 IFIH1Q9BYX4 1025 aaKnown RBP16.23■□□□□ 0.19
CCDC6-201ENST00000263102 BCAP29Q9UHQ4 241 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 RIPOR2Q9Y4F9 1068 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
CCDC6-201ENST00000263102 SNAP25P60880 206 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 BLIDQ8IZY5 108 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCDC6-201ENST00000263102 NLRP4Q96MN2 994 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 CFAP221Q4G0U5 840 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 ODR4Q5SWX8 454 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 ADALQ6DHV7 355 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 MAP7D3Q8IWC1 876 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 SERTAD1Q9UHV2 236 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
CCDC6-201ENST00000263102 ZNF233A6NK53 670 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 NDUFAB1O14561 156 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 CD58P19256 250 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 STX1BP61266 288 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 OR6B2Q6IFH4 312 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 SCN4BQ8IWT1 228 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 ATP6V0A1Q93050 837 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 KRT82Q9NSB4 513 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 ATF2P15336 505 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 NDUFAF2Q8N183 169 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 CEP170P1Q96L14 293 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 GDAP1L1Q96MZ0 367 aa16.22■□□□□ 0.19
CCDC6-201ENST00000263102 PMLP29590 882 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 PTK2BQ14289 1009 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 TSNAXIP1Q2TAA8 658 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 GOLGA5Q8TBA6 731 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 HEXIM2Q96MH2 286 aaKnown RBP16.21■□□□□ 0.19
CCDC6-201ENST00000263102 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.21■□□□□ 0.19
CCDC6-201ENST00000263102 PPFIA2O75334 1257 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 ZBTB7AO95365 584 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 YWHAHQ04917 246 aaPredicted RBP16.21■□□□□ 0.19
CCDC6-201ENST00000263102 PNMA1Q8ND90 353 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 RNF181Q9P0P0 153 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 HOXD10P28358 340 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 POLR2FP61218 127 aaKnown RBP16.21■□□□□ 0.19
CCDC6-201ENST00000263102 KRT71Q3SY84 523 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 SERPINB6P35237 376 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 MYO1EQ12965 1108 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 TMCO5AQ8N6Q1 288 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 MAP10Q9P2G4 905 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 SLC4A7Q9Y6M7 1214 aa16.21■□□□□ 0.19
CCDC6-201ENST00000263102 KRIT1O00522 736 aa16.21■□□□□ 0.18
CCDC6-201ENST00000263102 RGS16O15492 202 aaPredicted RBP16.21■□□□□ 0.18
CCDC6-201ENST00000263102 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.18
CCDC6-201ENST00000263102 PPP2R5EQ16537 467 aa16.21■□□□□ 0.18
CCDC6-201ENST00000263102 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.18
CCDC6-201ENST00000263102 ZNF804BA4D1E1 1349 aa16.21■□□□□ 0.18
CCDC6-201ENST00000263102 THEM5Q8N1Q8 247 aa16.2■□□□□ 0.18
CCDC6-201ENST00000263102 AFG1LQ8WV93 481 aa16.2■□□□□ 0.18
CCDC6-201ENST00000263102 SNX19Q92543 992 aa16.2■□□□□ 0.18
CCDC6-201ENST00000263102 JPH2Q9BR39 696 aaPredicted RBP16.2■□□□□ 0.18
CCDC6-201ENST00000263102 RAB17Q9H0T7 212 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms