RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 E4F1Q66K89 784 aaPredicted RBP11.83□□□□□ -0.51
CSNK1A1-201ENST00000261798 DHX40Q8IX18 779 aaKnown RBP11.83□□□□□ -0.51
CSNK1A1-201ENST00000261798 COG1Q8WTW3 980 aa11.83□□□□□ -0.51
CSNK1A1-201ENST00000261798 ABCC12Q96J65 1359 aa11.83□□□□□ -0.51
CSNK1A1-201ENST00000261798 DISP1Q96F81 1524 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 PCP11498 1178 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 CCZ1BP86790 482 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 FKBP3Q00688 224 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 NR5A1Q13285 461 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 FMO2Q99518 471 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 PCDHA12Q9UN75 941 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 PBRM1Q86U86 1689 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 LMNB1P20700 586 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 MAN1A1P33908 653 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 LRRC24Q50LG9 513 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 ATP8A2Q9NTI2 1148 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 PABPN1LA6NDY0 278 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 SEPT2Q15019 361 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 GSDMBQ8TAX9 411 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 KIFC2Q96AC6 838 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 DDX27Q96GQ7 796 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 PAGE5Q96GU1 130 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 ABHD10Q9NUJ1 306 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 TBX22Q9Y458 520 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 TRIM66O15016 1216 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 USP14P54578 494 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 MB21D1Q8N884 522 aa11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 BIN2Q9UBW5 565 aaPredicted RBP11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 FAF1Q9UNN5 650 aaPredicted RBP11.83□□□□□ -0.52
CSNK1A1-201ENST00000261798 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 PNMA1Q8ND90 353 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 PSMD1Q99460 953 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 PSD3Q9NYI0 1048 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 RASGRF2O14827 1237 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 IQCB1Q15051 598 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 C10orf76Q5T2E6 689 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 TSC22D3Q99576 134 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 CCDC188H7C350 402 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 PTPREP23469 700 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 POLE2P56282 527 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 LRRC23Q53EV4 343 aaPredicted RBP11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 PLAAQ9Y263 795 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 PDE1CQ14123 709 aaPredicted RBP11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 WDR24Q96S15 920 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 LMTK3Q96Q04 1460 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 ARHGAP31Q2M1Z3 1444 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 N4BP1O75113 896 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 THEGQ9P2T0 379 aa11.82□□□□□ -0.52
CSNK1A1-201ENST00000261798 LIFRP42702 1097 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 C6orf118Q5T5N4 469 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 PPP4R1Q8TF05 950 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 VIPAS39Q9H9C1 493 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 PCDHB6Q9Y5E3 794 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 CIAO1O76071 339 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 IWS1Q96ST2 819 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 TUBB6Q9BUF5 446 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 GMNCA6NCL1 334 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 EIF6P56537 245 aaKnown RBP11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 STRN3Q13033 797 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 MPHOSPH6Q99547 160 aaKnown RBP11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 BACH1O14867 736 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 SASH1O94885 1247 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 PDE6CP51160 858 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 VSNL1P62760 191 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 LARP4BQ92615 738 aaKnown RBP11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 PPFIA2O75334 1257 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 SERPING1P05155 500 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 CYP2J2P51589 502 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 ADCY2Q08462 1091 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 GPKOWQ92917 476 aaPredicted RBP eCLIP11.81□□□□□ -0.522e-6■□□□□ 8.7
CSNK1A1-201ENST00000261798 AIFM3Q96NN9 605 aa11.81□□□□□ -0.52
CSNK1A1-201ENST00000261798 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 TARSL2A2RTX5 802 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 STK10O94804 968 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 EPSTI1Q96J88 318 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 ELAC2Q9BQ52 826 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 NDST4Q9H3R1 872 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 RAB20Q9NX57 234 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 COL4A3BPQ9Y5P4 624 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 SLC1A4P43007 532 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 ACTN3Q08043 901 aaPredicted RBP11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 DDB1Q16531 1140 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 GEN1Q17RS7 908 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 RSAD2Q8WXG1 361 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 ZMYND12Q9H0C1 365 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 ATP10AO60312 1499 aa11.8□□□□□ -0.52
CSNK1A1-201ENST00000261798 KLRF2D3W0D1 207 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms