RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 BIN1O00499 593 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 STAT2P52630 851 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 MFAP3P55082 362 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CCDC186Q7Z3E2 898 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 PHLDB2Q86SQ0 1253 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 FBF1Q8TES7 1133 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CCT6BQ92526 530 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 RWDD2AQ9UIY3 292 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 FEM1BQ9UK73 627 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ABCB11O95342 1321 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ZMYM2Q9UBW7 1377 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 TAP1Q03518 808 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ZBTB16Q05516 673 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 MTA1Q13330 715 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ACSBG1Q96GR2 724 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ACCSQ96QU6 501 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ARMT1Q9H993 441 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 H7C1W4 665 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 RXRBP28702 533 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 EIF3BP55884 814 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 FKBP3Q00688 224 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 MCPH1Q8NEM0 835 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ORAI2Q96SN7 254 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CNOT10Q9H9A5 744 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 HYOU1Q9Y4L1 999 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 EFCAB8A8MWE9 144 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 IPO5O00410 1097 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 TFAP4Q01664 338 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 KRBA2Q6ZNG9 492 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 PIK3AP1Q6ZUJ8 805 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 C2CD5Q86YS7 1000 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 NECAB1Q8N987 351 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CCDC89Q8N998 374 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 SLC16A10Q8TF71 515 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CCDC114Q96M63 670 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 IFIH1Q9BYX4 1025 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 AATFQ9NY61 560 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CLEC11AQ9Y240 323 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 COL15A1P39059 1388 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CHRNDQ07001 517 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 KLHL30Q0D2K2 578 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 DENND2CQ68D51 928 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CCDC62Q6P9F0 684 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CCDC144CPQ8IYA2 1237 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CCDC97Q96F63 343 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 PANX2Q96RD6 677 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 C2orf40Q9H1Z8 148 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ZNF500O60304 480 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 PRPSAP1Q14558 356 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ZNF449Q6P9G9 518 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 NLRP10Q86W26 655 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 FAM178BQ8IXR5 827 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 STK11IPQ8N1F8 1099 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 MYCT1Q8N699 235 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 PPFIBP2Q8ND30 876 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 KIF2CQ99661 725 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 KLRF2D3W0D1 207 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 STXBP3O00186 592 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 TTI1O43156 1089 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 PSAPP07602 524 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 RPS12P25398 132 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 KRT9P35527 623 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 GARSP41250 739 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 PDE6CP51160 858 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 DCUN1D2Q6PH85 259 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 KRT27Q7Z3Y8 459 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 RBM46Q8TBY0 533 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 HESX1Q9UBX0 185 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 SLC12A6Q9UHW9 1150 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 UBN2Q6ZU65 1347 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ORC4O43929 436 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 GCNT3O95395 438 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 HOXD10P28358 340 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 MYO1EQ12965 1108 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 CACNA2D3Q8IZS8 1091 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 LSG1Q9H089 658 aaKnown RBP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 TBC1D22BQ9NU19 505 aa4.73□□□□□ -1.65
VPS13C-202ENST00000261517 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS13C-202ENST00000261517 ATP11AP98196 1134 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 LAMB3Q13751 1172 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 MORC3Q14149 939 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 GPATCH11Q8N954 259 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 MIGA1Q8NAN2 632 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.72□□□□□ -1.654e-6■■■■■ 41.2
VPS13C-202ENST00000261517 CRAMP1Q96RY5 1269 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 C1orf167Q5SNV9 1468 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 TAF5LO75529 589 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 PEX26Q7Z412 305 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 SEC62Q99442 399 aaKnown RBP4.72□□□□□ -1.65
VPS13C-202ENST00000261517 PASKQ96RG2 1323 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 CCDC169A6NNP5 214 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 GOLGA8MH3BSY2 632 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 SMAPO00193 183 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 KRT5P13647 590 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 PSMC2P35998 433 aaKnown RBP4.72□□□□□ -1.65
VPS13C-202ENST00000261517 RAPGEF1Q13905 1077 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 TDRD7Q8NHU6 1098 aaKnown RBP4.72□□□□□ -1.65
VPS13C-202ENST00000261517 CNTNAP4Q9C0A0 1308 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 CIITAP33076 1130 aa4.72□□□□□ -1.65
VPS13C-202ENST00000261517 KCTD2Q14681 263 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms