RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TTC19Q6DKK2 380 aaPredicted RBP17.26■□□□□ 0.35
DDX55-201ENST00000238146 MMS22LQ6ZRQ5 1243 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 C2CD5Q86YS7 1000 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 SUGP1Q8IWZ8 645 aaKnown RBP17.26■□□□□ 0.35
DDX55-201ENST00000238146 KAT2BQ92831 832 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 PSMB7Q99436 277 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 EHD2Q9NZN4 543 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 PCDHA6Q9UN73 950 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 PCDHA8Q9Y5H6 950 aa17.26■□□□□ 0.35
DDX55-201ENST00000238146 EPHB6O15197 1021 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 TCP1P17987 556 aaKnown RBP17.25■□□□□ 0.35
DDX55-201ENST00000238146 PLCG1P19174 1290 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 KIF11P52732 1056 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 TTMPQ5BVD1 217 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 FKBP15Q5T1M5 1219 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 EMBQ6PCB8 327 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 YY1AP1Q9H869 796 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 DCP1AQ9NPI6 582 aaPredicted RBP17.25■□□□□ 0.35
DDX55-201ENST00000238146 STIM2Q9P246 746 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 HYOU1Q9Y4L1 999 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 ITGB4P16144 1822 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 FLT1P17948 1338 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 SHTN1A0MZ66 631 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 CYP2D6P10635 497 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 STAG2Q8N3U4 1231 aa17.25■□□□□ 0.35
DDX55-201ENST00000238146 LCA5LO95447 670 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 EIF4A3P38919 411 aaKnown RBP17.24■□□□□ 0.35
DDX55-201ENST00000238146 ALS2CLQ60I27 953 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 CUEDC2Q9H467 287 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 STRCP1A6NGW2 1772 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 TSPY2A6NKD2 308 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 IRX3P78415 501 aaPredicted RBP17.24■□□□□ 0.35
DDX55-201ENST00000238146 SKOR1P84550 965 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 SALL4Q9UJQ4 1053 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 SIK3Q9Y2K2 1263 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 MYH10P35580 1976 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 ASIC1P78348 528 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 CCDC181Q5TID7 509 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 CABP7Q86V35 215 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 CAVIN3Q969G5 261 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
DDX55-201ENST00000238146 IQCDQ96DY2 449 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 C7orf25Q9BPX7 421 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 DEF6Q9H4E7 631 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
DDX55-201ENST00000238146 FAM207AQ9NSI2 230 aaPredicted RBP17.24■□□□□ 0.35
DDX55-201ENST00000238146 NCK2O43639 380 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 PRPHP41219 470 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 TXNRD1Q16881 649 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 HPS3Q969F9 1004 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 ALS2CR12Q96Q35 445 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 SEMA6BQ9H3T3 888 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 COL4A1P02462 1669 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 LAD1O00515 517 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 HSF2BPO75031 334 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 TNFRSF8P28908 595 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 KIAA0895Q8NCT3 520 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 NSUN4Q96CB9 384 aaKnown RBP17.23■□□□□ 0.35
DDX55-201ENST00000238146 RUFY1Q96T51 708 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 SAMM50Q9Y512 469 aa17.23■□□□□ 0.35
DDX55-201ENST00000238146 AKR1B10O60218 316 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 NTSR2O95665 410 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 SLC35G1Q2M3R5 365 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 VWA3BQ502W6 1294 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 GPIHBP1Q8IV16 184 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 ZIM3Q96PE6 472 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 TLR10Q9BXR5 811 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 RBM12Q9NTZ6 932 aaKnown RBP17.22■□□□□ 0.35
DDX55-201ENST00000238146 TCP11L1Q9NUJ3 509 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 PPP1R2P41236 205 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 PAFAH1B1P43034 410 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 PDCLQ13371 301 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 UBE4AQ14139 1066 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 PARP10Q53GL7 1025 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 C8orf74Q6P047 294 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 ANKRD13CQ8N6S4 541 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 DAGLBQ8NCG7 672 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
DDX55-201ENST00000238146 NDST4Q9H3R1 872 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 RREB1Q92766 1687 aa17.22■□□□□ 0.35
DDX55-201ENST00000238146 MAGEA1P43355 309 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 SF3B2Q13435 895 aaKnown RBP17.21■□□□□ 0.35
DDX55-201ENST00000238146 CAVIN4Q5BKX8 364 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 CENPPQ6IPU0 288 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 PNMA1Q8ND90 353 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 AK8Q96MA6 479 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.35
DDX55-201ENST00000238146 A0A1B0GUL6 1792 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 LRRC53A6NM62 1247 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 PJA2O43164 708 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 MECOMQ03112 1051 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 SH2D3CQ8N5H7 860 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 MTMR8Q96EF0 704 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 IL17RBQ9NRM6 502 aa17.21■□□□□ 0.35
DDX55-201ENST00000238146 A6NNZ2 444 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 KRT14P02533 472 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 INPP5BP32019 993 aa17.2■□□□□ 0.34
DDX55-201ENST00000238146 TUBB8Q3ZCM7 444 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms