RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 FMR1Q06787 632 aaKnown RBP eCLIP20.98■□□□□ 0.95
CTSA-201ENST00000191018 CUL4BQ13620 913 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 TBC1D10BQ4KMP7 808 aaPredicted RBP20.98■□□□□ 0.95
CTSA-201ENST00000191018 DRC7Q8IY82 874 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 LRRC15Q8TF66 581 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 CRYGNQ8WXF5 182 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 MMTAG2Q9BU76 263 aaKnown RBP20.98■□□□□ 0.95
CTSA-201ENST00000191018 KBTBD4Q9NVX7 518 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 HACL1Q9UJ83 578 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 ASTN2O75129 1339 aaPredicted RBP20.98■□□□□ 0.95
CTSA-201ENST00000191018 SMCHD1A6NHR9 2005 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 TXKP42681 527 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 USP11P51784 963 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 KIF4BQ2VIQ3 1234 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 CCDC186Q7Z3E2 898 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 MED15Q96RN5 788 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 ANO3Q9BYT9 981 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 GLIS2Q9BZE0 524 aaPredicted RBP20.98■□□□□ 0.95
CTSA-201ENST00000191018 BLZF1Q9H2G9 400 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 MAGEF1Q9HAY2 307 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 NRBP1Q9UHY1 535 aa20.98■□□□□ 0.95
CTSA-201ENST00000191018 OPLAHO14841 1288 aa20.97■□□□□ 0.95
CTSA-201ENST00000191018 MYL1P05976 194 aa20.97■□□□□ 0.95
CTSA-201ENST00000191018 PDIA5Q14554 519 aa20.97■□□□□ 0.95
CTSA-201ENST00000191018 TEX2Q8IWB9 1127 aa20.97■□□□□ 0.95
CTSA-201ENST00000191018 CHURC1Q8WUH1 139 aa20.97■□□□□ 0.95
CTSA-201ENST00000191018 GINM1Q9NU53 330 aa20.97■□□□□ 0.95
CTSA-201ENST00000191018 DDX25Q9UHL0 483 aaKnown RBP20.97■□□□□ 0.95
CTSA-201ENST00000191018 SBF1O95248 1867 aa20.97■□□□□ 0.95
CTSA-201ENST00000191018 ATP1A3P13637 1013 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 PTGS1P23219 599 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 FANCCQ00597 558 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 CCDC144BQ3MJ40 725 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 USH1GQ495M9 461 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 MOXD1Q6UVY6 613 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 MBOAT7Q96N66 472 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 P2RX7Q99572 595 aaKnown RBP20.96■□□□□ 0.95
CTSA-201ENST00000191018 XPO4Q9C0E2 1151 aaKnown RBP20.96■□□□□ 0.95
CTSA-201ENST00000191018 RANBP17Q9H2T7 1088 aaKnown RBP20.96■□□□□ 0.95
CTSA-201ENST00000191018 FANCLQ9NW38 375 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 CYP3A7-CYP3A51PA0A087WV96 503 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 CD44P16070 742 aaKnown RBP20.96■□□□□ 0.95
CTSA-201ENST00000191018 PLCG1P19174 1290 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 CYP3A7P24462 503 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 TRAF1Q13077 416 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 TMEM266Q2M3C6 531 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 FAM160B2Q86V87 743 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 RASSF8Q8NHQ8 419 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 HAS1Q92839 578 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 DEFB129Q9H1M3 183 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 IFNKQ9P0W0 207 aa20.96■□□□□ 0.95
CTSA-201ENST00000191018 PPP1R3GB7ZBB8 358 aa20.95■□□□□ 0.94
CTSA-201ENST00000191018 PIK3CDO00329 1044 aa20.95■□□□□ 0.94
CTSA-201ENST00000191018 RPN1P04843 607 aaKnown RBP20.95■□□□□ 0.94
CTSA-201ENST00000191018 RMND1Q9NWS8 449 aa20.95■□□□□ 0.94
CTSA-201ENST00000191018 DOCK1Q14185 1865 aa20.95■□□□□ 0.94
CTSA-201ENST00000191018 CTNND1O60716 968 aaKnown RBP20.94■□□□□ 0.94
CTSA-201ENST00000191018 FOSP01100 380 aaPredicted RBP20.94■□□□□ 0.94
CTSA-201ENST00000191018 ZNF18P17022 549 aa20.94■□□□□ 0.94
CTSA-201ENST00000191018 SEMA3FQ13275 785 aa20.94■□□□□ 0.94
CTSA-201ENST00000191018 ZYXQ15942 572 aaKnown RBP20.94■□□□□ 0.94
CTSA-201ENST00000191018 CCDC84Q86UT8 332 aaPredicted RBP20.94■□□□□ 0.94
CTSA-201ENST00000191018 RAB34Q9BZG1 259 aa20.94■□□□□ 0.94
CTSA-201ENST00000191018 LRWD1Q9UFC0 647 aa20.94■□□□□ 0.94
CTSA-201ENST00000191018 FEM1BQ9UK73 627 aa20.94■□□□□ 0.94
CTSA-201ENST00000191018 NFE2L3Q9Y4A8 694 aa20.94■□□□□ 0.94
CTSA-201ENST00000191018 PLIN2Q99541 437 aa20.94■□□□□ 0.94
CTSA-201ENST00000191018 H7C1D1 291 aa20.93■□□□□ 0.94
CTSA-201ENST00000191018 TAL1P17542 331 aaPredicted RBP20.93■□□□□ 0.94
CTSA-201ENST00000191018 KCNB1Q14721 858 aa20.93■□□□□ 0.94
CTSA-201ENST00000191018 ZNF658Q5TYW1 1059 aaPredicted RBP20.93■□□□□ 0.94
CTSA-201ENST00000191018 TRMT44Q8IYL2 757 aaKnown RBP20.93■□□□□ 0.94
CTSA-201ENST00000191018 CALML4Q96GE6 196 aa20.93■□□□□ 0.94
CTSA-201ENST00000191018 ZNF341Q9BYN7 854 aa20.93■□□□□ 0.94
CTSA-201ENST00000191018 SPON1Q9HCB6 807 aa20.93■□□□□ 0.94
CTSA-201ENST00000191018 KCNMB3Q9NPA1 279 aa20.93■□□□□ 0.94
CTSA-201ENST00000191018 KLRC4O43908 158 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 SREBF1P36956 1147 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 ARHGAP4P98171 946 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 GRB10Q13322 594 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 NBPF12Q5TAG4 269 aaPredicted RBP20.92■□□□□ 0.94
CTSA-201ENST00000191018 KIAA1683Q9H0B3 1180 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 GPRC5DQ9NZD1 345 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 POTEMA6NI47 508 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 LMNB1P20700 586 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 SMYD4Q8IYR2 804 aaPredicted RBP20.92■□□□□ 0.94
CTSA-201ENST00000191018 GPC2Q8N158 579 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 KIFC2Q96AC6 838 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 PNMA5Q96PV4 448 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 IMPACTQ9P2X3 320 aa20.92■□□□□ 0.94
CTSA-201ENST00000191018 SPDYE3A6NKU9 549 aa20.91■□□□□ 0.94
CTSA-201ENST00000191018 LPAR1Q92633 364 aa20.91■□□□□ 0.94
CTSA-201ENST00000191018 FEZ1Q99689 392 aa20.91■□□□□ 0.94
CTSA-201ENST00000191018 STK17AQ9UEE5 414 aa20.91■□□□□ 0.94
CTSA-201ENST00000191018 SYNRGQ9UMZ2 1314 aa20.91■□□□□ 0.94
CTSA-201ENST00000191018 CBFA2T2O43439 604 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 CIITAP33076 1130 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 UBASH3AP57075 661 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 SPATA1Q5VX52 437 aa20.9■□□□□ 0.94
CTSA-201ENST00000191018 ARHGAP27Q6ZUM4 889 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms