RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 ACTN1P12814 892 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 BMP1P13497 986 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 POU3F3P20264 500 aaPredicted RBP13.22□□□□□ -0.29
NME1-201ENST00000013034 PDE4AP27815 886 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 RFC2P35250 354 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 CPT1AP50416 773 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 TFAP4Q01664 338 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 DUSP28Q4G0W2 176 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 MUM1L1Q5H9M0 696 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 TMEM67Q5HYA8 995 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 EEPD1Q7L9B9 569 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 VWCEQ96DN2 955 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 SLC9A7Q96T83 725 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 NAPBQ9H115 298 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
NME1-201ENST00000013034 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
NME1-201ENST00000013034 XIRP2A4UGR9 3374 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 ICAM1P05362 532 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 CA3P07451 260 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 MYOGP15173 224 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 PTGS1P23219 599 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 MCCP23508 829 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 PPARAQ07869 468 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 TTLL4Q14679 1199 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 SKIV2LQ15477 1246 aaKnown RBP13.21□□□□□ -0.29
NME1-201ENST00000013034 RCSD1Q6JBY9 416 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 NSMFQ6X4W1 530 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 KCTD1Q719H9 257 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 PRR12Q9ULL5 1215 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 STX8Q9UNK0 236 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 COG5Q9UP83 839 aa13.21□□□□□ -0.29
NME1-201ENST00000013034 NCOR1O75376 2440 aa13.21□□□□□ -0.3
NME1-201ENST00000013034 RAD50Q92878 1312 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 CYP2C9P11712 490 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 ALDH5A1P51649 535 aaPredicted RBP13.2□□□□□ -0.3
NME1-201ENST00000013034 PURAQ00577 322 aaKnown RBP13.2□□□□□ -0.3
NME1-201ENST00000013034 TFF2Q03403 129 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 PHOSPHO2Q8TCD6 241 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 NECAB3Q96P71 396 aaPredicted RBP13.2□□□□□ -0.3
NME1-201ENST00000013034 TRMT13Q9NUP7 481 aaKnown RBP13.2□□□□□ -0.3
NME1-201ENST00000013034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
NME1-201ENST00000013034 MTCH2Q9Y6C9 303 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
NME1-201ENST00000013034 TANC1Q9C0D5 1861 aa13.2□□□□□ -0.3
NME1-201ENST00000013034 LCTP09848 1927 aa13.19□□□□□ -0.3
NME1-201ENST00000013034 IGHDP01880 384 aa13.19□□□□□ -0.3
NME1-201ENST00000013034 KCNQ1P51787 676 aa13.19□□□□□ -0.3
NME1-201ENST00000013034 BRDTQ58F21 947 aaPredicted RBP13.19□□□□□ -0.3
NME1-201ENST00000013034 TMEM63BQ5T3F8 832 aa13.19□□□□□ -0.3
NME1-201ENST00000013034 DEFB128Q7Z7B8 93 aa13.19□□□□□ -0.3
NME1-201ENST00000013034 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
NME1-201ENST00000013034 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
NME1-201ENST00000013034 MTG1Q9BT17 334 aaPredicted RBP13.19□□□□□ -0.3
NME1-201ENST00000013034 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
NME1-201ENST00000013034 RANBP17Q9H2T7 1088 aaKnown RBP13.19□□□□□ -0.3
NME1-201ENST00000013034 GPHNQ9NQX3 736 aaPredicted RBP13.19□□□□□ -0.3
NME1-201ENST00000013034 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
NME1-201ENST00000013034 TTC41PQ6P2S7 1318 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 RBM47A0AV96 593 aaKnown RBP13.18□□□□□ -0.3
NME1-201ENST00000013034 NKRFO15226 690 aaKnown RBP eCLIP13.18□□□□□ -0.3
NME1-201ENST00000013034 EIF5BO60841 1220 aaKnown RBP13.18□□□□□ -0.3
NME1-201ENST00000013034 BAIAP3O94812 1187 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 MYL3P08590 195 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 SNAP25P60880 206 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
NME1-201ENST00000013034 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 MPHOSPH6Q99547 160 aaKnown RBP13.18□□□□□ -0.3
NME1-201ENST00000013034 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 HCN4Q9Y3Q4 1203 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 PCDHB15Q9Y5E8 787 aa13.18□□□□□ -0.3
NME1-201ENST00000013034 TRANK1O15050 2925 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 EPOPA6NHQ4 379 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 NFIBO00712 420 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 KPNA6O60684 536 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 NOVP48745 357 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 TAP1Q03518 808 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 BAATQ14032 418 aaPredicted RBP13.17□□□□□ -0.3
NME1-201ENST00000013034 FAM47CQ5HY64 1035 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 SMC5Q8IY18 1101 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
NME1-201ENST00000013034 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
NME1-201ENST00000013034 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
NME1-201ENST00000013034 SCN10AQ9Y5Y9 1956 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 MYO9BQ13459 2157 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 PTPDC1A2A3K4 754 aa13.16□□□□□ -0.3
NME1-201ENST00000013034 RFXAPO00287 272 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms