RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Arl8aQ8VEH3 186 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Q922C1 641 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Kdm3bQ6ZPY7 1562 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Tsta3P23591 321 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Gna14P30677 355 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Sh3gl3Q62421 347 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Nuak1Q641K5 658 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Atp2b4Q6Q477 1205 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Pcdhb15Q91Y04 786 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ttc1Q91Z38 292 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Myo1cQ9WTI7 1063 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Krt24A1L317 512 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Pgrmc1O55022 195 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Nr2f2P43135 414 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Plbd2Q3TCN2 594 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Fam81aQ3UXZ6 364 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Syne3Q4FZC9 975 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Polr2bQ8CFI7 1174 aaKnown RBP15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Lrrc41Q8K1C9 807 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Emilin2Q8K482 1074 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Nphp4P59240 1425 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Arhgef10lA2AWP8 1280 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Pagr1bF6V0H0 108 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Acbd5Q5XG73 508 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Tbc1d1Q60949 1255 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ccdc15Q8C9M2 810 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Eif4a3Q91VC3 411 aaKnown RBP15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Pagr1aQ99L02 253 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Add3Q9QYB5 706 aaKnown RBP15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Aldh18a1Q9Z110 795 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Atp8b1Q148W0 1251 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Bend3Q6PAL0 825 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Aggf1Q7TN31 711 aa15.18■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Cyth3O08967 399 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Axin2O88566 840 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Dpp8Q80YA7 892 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Pomgnt1Q91X88 660 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Pstpip2Q99M15 334 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Cfap221A9Q751 836 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Dnaaf5B9EJR8 853 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Fdx1P46656 188 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 XpcP51612 930 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Tbc1d30Q69ZT9 766 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ckap2lQ7TS74 745 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Cfap70D3YVL2 1141 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ankfy1Q810B6 1169 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Enox1Q8BHR2 643 aaKnown RBP15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Snx14Q8BHY8 964 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Lsm14bQ8CGC4 385 aaKnown RBP15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Mms19Q9D071 1031 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Psmg1Q9JK23 289 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Scaf11E9PZM7 1456 aaKnown RBP15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Talpid3E9PV87 1520 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Mmrn1B2RPV6 1210 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Olfr118Q7TRJ6 321 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 QarsQ8BML9 775 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Gm16486A0A1D5RMD1 1434 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 A0A1Y7VML8 143 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Gm9992B2RWK3 458 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Vmn2r68L7N2B3 851 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 C87499Q3UX49 493 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Tgfb1i1Q62219 461 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Unc93aQ710D3 458 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Usp8Q80U87 1080 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Prpf31Q8CCF0 499 aaKnown RBP15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Rmi1Q9D4G9 616 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ube3bQ9ES34 1070 aa15.17■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ap1m1P35585 423 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Arhgap29Q8CGF1 1266 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ints4Q8CIM8 964 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 P3h4Q8K2B0 443 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Txnrd1Q9JMH6 613 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Stx1bP61264 288 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Zfp449Q8CB76 518 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Cttnbp2nlQ99LJ0 638 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Itgb1bp2Q9R000 350 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Stk11Q9WTK7 436 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Zfp408H7BX78 710 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Il7P10168 154 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 NfkbibQ60778 359 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Arid3aQ62431 601 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Sval3Q76I99 144 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Cct8l1Q80YT3 562 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Arid5bQ8BM75 1188 aaKnown RBP15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Abt1Q9QYL7 269 aaKnown RBP15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Gimap9G3X987 291 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Stkld1Q80YS9 662 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Wdr46Q9Z0H1 622 aaKnown RBP15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Lmo7E9PYF4 1699 aaKnown RBP15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Abca5Q8K448 1642 aa15.16■□□□□ 0.02
Col3a1-201ENSMUST00000087883 TprnA2AI08 749 aaKnown RBP15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Gimd1E9PW74 217 aa15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Copb2O55029 905 aa15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 TrhQ62361 256 aa15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Anks1bQ8BIZ1 1259 aa15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ppp4r4Q8C0Y0 875 aa15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ppp1r14cQ8R4S0 164 aa15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Trim16Q99PP9 556 aa15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 4931423N10RikQ9D4J9 382 aa15.15■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Casp8O89110 480 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms