RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Kif11Q6P9P6 1052 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Sned1Q70E20 1403 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Gm9758Q80ZT2 255 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 SpidrQ8BGX7 933 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Col23a1Q8K4G2 532 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Yipf1Q91VU1 306 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Lzts2Q91YU6 671 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Thap2Q9D305 217 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Spata1Q9D5R4 444 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 MajinQ9D992 256 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Znf287Q9EQB9 759 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Nme9A0A1L1SUL6 329 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ifi207E9Q3L4 978 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 UncxO08934 530 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 GmnnO88513 206 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Adssl1P28650 457 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Vcam1P29533 739 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Hmgb2P30681 210 aaKnown RBP12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Fdx1P46656 188 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 AaasP58742 546 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ttbk2Q3UVR3 1243 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Kctd1Q5M956 257 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Rasa3Q60790 834 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Dpf2Q61103 391 aaKnown RBP12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 RragbQ6NTA4 374 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Gpbp1Q6NXH3 473 aaKnown RBP12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Ppp2r5aQ6PD03 486 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 GypcQ78HU7 95 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mtmr6Q8VE11 617 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Mmtag2Q99LX5 260 aaKnown RBP12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Pex3Q9QXY9 372 aa12.65□□□□□ -0.38
Ddx55-201ENSMUST00000071057 Col5a2Q3U962 1497 aa12.65□□□□□ -0.39
Ddx55-201ENSMUST00000071057 IqceQ6PCQ0 778 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Anks1bQ8BIZ1 1259 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Atxn7Q8R4I1 867 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 AticQ9CWJ9 592 aaKnown RBP12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Calr3Q9D9Q6 380 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Golga5Q9QYE6 729 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Cul4bA2A432 970 aaKnown RBP12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 GabreA2AMW3 916 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Btn2a2A4QPC6 514 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Serpina16D3Z660 418 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Nat3P50296 290 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Ift88Q61371 824 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Tbc1d12Q6A039 696 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Haus6Q6NV99 933 aaKnown RBP12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Clca4aQ6Q473 924 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Lca5Q80ST9 704 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Zdhhc14Q8BQQ1 489 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Mboat7Q8CHK3 473 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 AdpgkQ8VDL4 496 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Krt78E9Q0F0 1068 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Gna11P21278 359 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Prom2Q3UUY6 835 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Bag1Q60739 355 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Panx2Q6IMP4 677 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Gpcpd1Q8C0L9 675 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Spata16Q8C636 571 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Fam193aQ8CGI1 1231 aaKnown RBP12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Ttll1Q91V51 423 aa12.64□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Spata18Q0P557 537 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 L1td1Q587J6 782 aaKnown RBP12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Tnni3kQ5GIG6 834 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Abcf1Q6P542 837 aaKnown RBP12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Sval3Q76I99 144 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Necab1Q8BG18 352 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Cdan1Q8CC12 1239 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Cypt1Q8CH20 168 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Plekhg6Q8R0J1 787 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Ppp2r5dQ91V89 594 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Trub2Q91WG3 331 aaKnown RBP12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 TbcbQ9D1E6 244 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Cd274Q9EP73 290 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Adamtsl1Q8BLI0 1745 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Ccdc6D3YZP9 469 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Tdo2P48776 406 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Gdf10P97737 476 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Mtss1lQ6P9S0 715 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Txndc5Q91W90 417 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Q91WD4 421 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Mtmr9Q9Z2D0 545 aa12.63□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Rps6ka3P18654 740 aaKnown RBP12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Tpm1P58771 284 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Cnga2Q62398 664 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Cnnm4Q69ZF7 771 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Ift74Q8BKE9 600 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Hs2st1Q8R3H7 356 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Pcdha12Q91Y18 950 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Snrnp35Q9D384 244 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Gm5114W4VSN8 858 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Trim30cD3YVI9 513 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Nr1i2O54915 431 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Ranbp1P34022 203 aaKnown RBP12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Specc1lQ2KN98 1118 aaKnown RBP12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Scnn1aQ61180 699 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Ddx31Q6NZQ2 687 aaKnown RBP12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Txndc16Q7TN22 820 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Frat2Q8K025 231 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Slc5a4aQ9ET37 656 aa12.62□□□□□ -0.39
Ddx55-201ENSMUST00000071057 Kif23E9Q5G3 953 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms