RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Ppp2r2cQ8BG02 447 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Thap3Q8BJ25 218 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Ccdc122Q8BVN0 290 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Slc9b1Q8C0X2 565 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Tango6Q8C3S2 1079 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Tmem63cQ8CBX0 802 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Fermt2Q8CIB5 680 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Slc5a5Q99PN0 618 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 OatP29758 439 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Pbx1P41778 430 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Akr1b1P45376 316 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Mybl2P48972 704 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Chp1P61022 195 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Psmc6P62334 389 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Meis2P97367 477 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Apba2P98084 750 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Psg29Q3URN6 468 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Brd2Q7JJ13 798 aaKnown RBP9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 PaoxQ8C0L6 504 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Depdc1aQ8CIG0 804 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Znf131Q8K3J5 619 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Dcaf8Q8N7N5 591 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Cul5Q9D5V5 780 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 NapaQ9DB05 295 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Ly6iQ9WU67 134 aa9.47□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Setd4P58467 439 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Tigd5Q499M4 642 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Nlrp2Q4PLS0 1046 aaKnown RBP9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Taok2Q6ZQ29 1240 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Ccdc172Q810N9 267 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Camkk2Q8C078 588 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Spire2Q8K1S6 718 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Dnaaf4Q8R368 420 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Exoc1Q8R3S6 894 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Tor1aip1Q921T2 595 aaKnown RBP9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Taf1dQ9D4V4 322 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Tbx18Q9EPZ6 613 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Irx4Q9QY61 515 aa9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 Pdcd6ipQ9WU78 869 aaKnown RBP9.46□□□□□ -0.89
Ptchd1-201ENSMUST00000038665 MsnP26041 577 aaKnown RBP9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Igf2bp2Q5SF07 592 aaKnown RBP9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Rgl1Q60695 768 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Igbp1Q61249 340 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Mcm7Q61881 719 aaKnown RBP9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Secisbp2lQ6A098 1086 aaKnown RBP9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Vps18Q8R307 973 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Dph6Q9CQ28 267 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 AacsQ9D2R0 672 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 March8Q9DBD2 286 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Znf287Q9EQB9 759 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Uchl5Q9WUP7 329 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Gm28042B7ZCM9 1014 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Zc3h7bF8VPP8 982 aaKnown RBP9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Vmn2r71L7N2D8 855 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 NefhP19246 1090 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Traf1P39428 409 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Gxylt1Q3UHH8 404 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Bag1Q60739 355 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 PicalmQ7M6Y3 660 aaKnown RBP9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ccdc38Q8CDN8 563 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Frmpd3A0A140LIW3 1774 aa9.46□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Pcdh11xF6ZNL5 1338 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Meis3P97368 378 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 D630036H23RikQ3UQD6 204 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Scfd1Q8BRF7 639 aaKnown RBP9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ddx19bQ8BZY3 494 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Csgalnact2Q8C1F4 542 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ccdc14Q8K2J4 934 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 F11Q91Y47 624 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Mfap3lQ9D3X9 409 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ccdc6D3YZP9 469 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Hoxa11P31311 313 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Pth1rP41593 591 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Hps5P59438 1126 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ssrp1Q08943 708 aaKnown RBP9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Znf697Q569E7 569 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Abcf1Q6P542 837 aaKnown RBP9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Drc7Q6V3W6 876 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Zfp397Q7TNK4 527 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Tmem134Q8R0J4 195 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Azi2Q9QYP6 405 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ccdc88cQ6VGS5 2009 aa9.45□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Slc27a3O88561 667 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Gng11P61953 73 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Lrrc55Q3UY51 311 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Znf827Q505G8 1078 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Atp13a3Q5XF89 1219 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Lamc2Q61092 1191 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 EregQ61521 162 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Senp6Q6P7W0 1132 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Q8C5C9 218 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Rfc4Q99J62 364 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Ccdc105Q9D4K7 499 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Pkd2l2Q9JLG4 621 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Arl6ip4Q9JM93 229 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Gm38392E9Q2A2 434 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Pagr1bF6V0H0 108 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Usp17ldG5E8G2 545 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Usp17lcG5E8I7 545 aa9.44□□□□□ -0.9
Ptchd1-201ENSMUST00000038665 Tpp1O89023 562 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms