RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Prdm11A2AGX3 565 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 ArsiQ32KI9 573 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Rufy4Q3TYX8 563 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 ChukQ60680 745 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 RragbQ6NTA4 374 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ublcp1Q8BGR9 318 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Psmd2Q8VDM4 908 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Zbtb22Q9Z0G7 638 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Gm10110D3Z5M2 615 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 FosbP13346 338 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Mcm10Q0VBD2 885 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Lrriq3Q14DL3 633 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 CpQ61147 1061 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Fkbp3Q62446 224 aaKnown RBP4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Zranb1Q7M760 708 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ctdp1Q7TSG2 960 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Zbtb12Q9Z150 459 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Micall2Q3TN34 1009 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Nlrp4eQ66X19 978 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ccdc50Q810U5 305 aaKnown RBP4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Depdc1bQ8BH88 529 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Tmco6Q8BQX5 494 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Gimap5Q8BWF2 308 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Bag2Q91YN9 210 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 3830403N18RikQ9D6C3 208 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 1700011I03RikE9PYL8 271 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Cd3dP04235 173 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Gm1604bQ3TRG0 118 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 DbnlQ62418 436 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Krt12Q64291 487 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Rbm41Q8JZV4 413 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ccdc92Q8VDN4 314 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ccdc13D3YV10 709 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Nr1i3O35627 358 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Nhej1Q3KNJ2 295 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Gm5935Q497S0 212 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Znf148Q61624 794 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Psma8Q9CWH6 250 aa4.97□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Nrxn3Q6P9K9 1571 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Rad51bO35719 350 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Eif1adQ3THJ3 170 aaKnown RBP4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Hdac6Q9Z2V5 1149 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Prdm2A2A7B5 1709 aaKnown RBP4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Usp44Q8C2S0 711 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Wdr24Q8CFJ9 790 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 SdsQ8VBT2 327 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Pex19Q8VCI5 299 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ubac1Q8VDI7 409 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Ccdc182Q9D9C6 152 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Zscan12Q9Z1D7 501 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Nfat5Q9WV30 1534 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Gm28360A0A087WR25 190 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Speer2E9Q9U2 264 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Taf4E9QAP7 1042 aaKnown RBP4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Smg5Q6ZPY2 1017 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Daam2Q80U19 1115 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Krr1Q8BGA5 380 aaKnown RBP4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Trpa1Q8BLA8 1125 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Thap12Q9CUX1 758 aa4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 SmapQ9R0P4 181 aaKnown RBP4.96□□□□□ -1.61
Prkdc-201ENSMUST00000023352 Phlpp1Q8CHE4 1687 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Lrrc74aA0A1Y7VMD6 494 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gm6121L7MUF1 212 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Nr1i2O54915 431 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Psma3O70435 255 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Serpina1aP07758 413 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Serpina1bP22599 413 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 InaP46660 501 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Mmp14P53690 582 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Serpina1cQ00896 412 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Serpina1dQ00897 413 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Mettl14Q3UIK4 456 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Enox1Q8BHR2 643 aaKnown RBP4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 HscbQ8K3A0 234 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Prpf3Q922U1 683 aaKnown RBP4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Def8Q99J78 448 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 CutaQ9CQ89 177 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Znf609Q8BZ47 1413 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Speer4eK7N6S8 255 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gm5169Q5M8P2 212 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ppp1r14bQ62084 147 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Phf23Q8BSN5 401 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 E4f1Q8CCE9 783 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Ophn1Q99J31 802 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Cnbd1B1AWM0 430 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 GscQ02591 256 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 ScocQ78YZ6 125 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Atp5dQ9D3D9 168 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Popdc2Q9ES82 367 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Dbn1Q9QXS6 706 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Nek3Q9R0A5 511 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Sap30bpQ02614 308 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Scg2Q03517 617 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Frmd8Q3UFK8 466 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Trim68Q8K243 485 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gdap1l1Q8VE33 370 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 SmtnQ921U8 923 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 CenpkQ9ESN5 271 aa4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 LbrQ3U9G9 626 aaKnown RBP4.96□□□□□ -1.62
Prkdc-201ENSMUST00000023352 Gm14685Q52KH6 695 aa4.96□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms