RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 CSM2P40465 213 aa2.55□□□□□ -2
snR54snR54 SNG1P46950 547 aa2.55□□□□□ -2
snR54snR54 SIP4P46954 829 aa2.55□□□□□ -2
snR54snR54 YJL132WP47014 750 aa2.55□□□□□ -2
snR54snR54 WSC2P53832 503 aa2.55□□□□□ -2
snR54snR54 MSC1Q03104 513 aa2.55□□□□□ -2
snR54snR54 CAR1P00812 333 aaKnown RBP2.54□□□□□ -2
snR54snR54 PUP3P25451 205 aaKnown RBP2.54□□□□□ -2
snR54snR54 IMG1P25626 169 aa2.54□□□□□ -2
snR54snR54 FRE1P32791 686 aa2.54□□□□□ -2
snR54snR54 TIF3P34167 436 aaKnown RBP2.54□□□□□ -2
snR54snR54 NPR2P39923 615 aa2.54□□□□□ -2
snR54snR54 YEL068CP39977 110 aa2.54□□□□□ -2
snR54snR54 KAP123P40069 1113 aaKnown RBP2.54□□□□□ -2
snR54snR54 IDP2P41939 412 aa2.54□□□□□ -2
snR54snR54 PTR3P43606 678 aa2.54□□□□□ -2
snR54snR54 SCD6P45978 349 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
snR54snR54 DSD1P53095 428 aa2.54□□□□□ -2
snR54snR54 DRN1P53255 507 aaKnown RBP2.54□□□□□ -2
snR54snR54 CBK1P53894 756 aa2.54□□□□□ -2
snR54snR54 EFM6P53970 246 aa2.54□□□□□ -2
snR54snR54 SHR3Q02774 210 aa2.54□□□□□ -2
snR54snR54 ATG16Q03818 150 aa2.54□□□□□ -2
snR54snR54 YDL057WQ07379 328 aa2.54□□□□□ -2
snR54snR54 TCO89Q08921 799 aa2.54□□□□□ -2
snR54snR54 YCL021W-AQ96VH3 125 aa2.54□□□□□ -2
snR54snR54 ARD1P07347 238 aaPredicted RBP2.53□□□□□ -2
snR54snR54 PEP5P12868 1029 aa2.53□□□□□ -2
snR54snR54 PMU1P36069 295 aa2.53□□□□□ -2
snR54snR54 MRPL4P36517 319 aa2.53□□□□□ -2
snR54snR54 SHE10P53075 577 aa2.53□□□□□ -2
snR54snR54 ADD37Q03233 198 aa2.53□□□□□ -2
snR54snR54 SYO1Q07395 620 aa2.53□□□□□ -2
snR54snR54 NCE102Q12207 173 aaRIP-Chip data2.53□□□□□ -2not detected
snR54snR54 YDL009CQ12210 107 aa2.53□□□□□ -2
snR54snR54 RER1P25560 188 aa2.52□□□□□ -2.01
snR54snR54 LDB16P25587 256 aa2.52□□□□□ -2.01
snR54snR54 TUL1P36096 758 aa2.52□□□□□ -2.01
snR54snR54 YKL023WP36103 277 aaKnown RBP2.52□□□□□ -2.01
snR54snR54 RPL32P38061 130 aaKnown RBP2.52□□□□□ -2.01
snR54snR54 ICS2P38284 255 aa2.52□□□□□ -2.01
snR54snR54 SHO1P40073 367 aa2.52□□□□□ -2.01
snR54snR54 DPH1P40487 425 aaKnown RBP2.52□□□□□ -2.01
snR54snR54 MKT1P40850 830 aaKnown RBP2.52□□□□□ -2.01
snR54snR54 LCL3P53153 274 aa2.52□□□□□ -2.01
snR54snR54 YSA1Q01976 231 aa2.52□□□□□ -2.01
snR54snR54 SLD5Q03406 294 aa2.52□□□□□ -2.01
snR54snR54 BNA5Q05979 453 aa2.52□□□□□ -2.01
snR54snR54 SDH5Q08230 162 aa2.52□□□□□ -2.01
snR54snR54 ETT1Q08421 412 aaKnown RBP2.52□□□□□ -2.01
snR54snR54 YPL272CQ08984 517 aa2.52□□□□□ -2.01
snR54snR54 RAD52P06778 471 aaKnown RBP2.51□□□□□ -2.01
snR54snR54 KAR3P17119 729 aa2.51□□□□□ -2.01
snR54snR54 BOS1P25385 244 aa2.51□□□□□ -2.01
snR54snR54 SAC6P32599 642 aaKnown RBP2.51□□□□□ -2.01
snR54snR54 UBP11P36026 717 aa2.51□□□□□ -2.01
snR54snR54 RRN3P36070 627 aa2.51□□□□□ -2.01
snR54snR54 YBP1P38315 674 aa2.51□□□□□ -2.01
snR54snR54 ARC1P46672 376 aaKnown RBP2.51□□□□□ -2.01
snR54snR54 YJR154WP47181 346 aa2.51□□□□□ -2.01
snR54snR54 APT1P49435 187 aaKnown RBP2.51□□□□□ -2.01
snR54snR54 ALT2P52892 507 aa2.51□□□□□ -2.01
snR54snR54 YGR126WP53274 230 aa2.51□□□□□ -2.01
snR54snR54 YGR127WP53275 312 aa2.51□□□□□ -2.01
snR54snR54 YML131WQ03102 365 aa2.51□□□□□ -2.01
snR54snR54 SGS1P35187 1447 aa2.51□□□□□ -2.01
snR54snR54 FUM1P08417 488 aaKnown RBP2.5□□□□□ -2.01
snR54snR54 CDC24P11433 854 aaPredicted RBP2.5□□□□□ -2.01
snR54snR54 ATR1P13090 542 aa2.5□□□□□ -2.01
snR54snR54 RNA14P25298 677 aaKnown RBP2.5□□□□□ -2.01
snR54snR54 POL4P25615 582 aa2.5□□□□□ -2.01
snR54snR54 AUR1P36107 401 aaPredicted RBP2.5□□□□□ -2.01
snR54snR54 FAA2P39518 744 aa2.5□□□□□ -2.01
snR54snR54 FAR3P46671 204 aa2.5□□□□□ -2.01
snR54snR54 BSC5P53755 489 aa2.5□□□□□ -2.01
snR54snR54 YML037CQ03703 340 aa2.5□□□□□ -2.01
snR54snR54 MRPL51Q06090 140 aaPredicted RBP2.5□□□□□ -2.01
snR54snR54 LUC7Q07508 261 aaPredicted RBP2.5□□□□□ -2.01
snR54snR54 YOR365CQ08844 703 aa2.5□□□□□ -2.01
snR54snR54 SPE4Q12455 300 aa2.5□□□□□ -2.01
snR54snR54 SKM1Q12469 655 aa2.5□□□□□ -2.01
snR54snR54 MF(ALPHA)1P01149 165 aa2.49□□□□□ -2.01
snR54snR54 PUT3P25502 979 aaPredicted RBP2.49□□□□□ -2.01
snR54snR54 SSE2P32590 693 aaKnown RBP2.49□□□□□ -2.01
snR54snR54 YBR144CP34215 104 aa2.49□□□□□ -2.01
snR54snR54 FUI1P38196 639 aa2.49□□□□□ -2.01
snR54snR54 RFS1P38234 210 aaKnown RBP2.49□□□□□ -2.01
snR54snR54 YHR210CP38893 341 aa2.49□□□□□ -2.01
snR54snR54 AFG3P39925 761 aa2.49□□□□□ -2.01
snR54snR54 HAT2P39984 401 aa2.49□□□□□ -2.01
snR54snR54 ALG8P40351 577 aa2.49□□□□□ -2.01
snR54snR54 MSO1P53604 210 aaKnown RBP2.49□□□□□ -2.01
snR54snR54 BUD22Q04347 519 aaKnown RBP2.49□□□□□ -2.01
snR54snR54 IVY1Q04934 453 aa2.49□□□□□ -2.01
snR54snR54 SSP2Q08646 371 aa2.49□□□□□ -2.01
snR54snR54 HNT3Q08702 217 aa2.49□□□□□ -2.01
snR54snR54 CTF3Q12748 733 aa2.49□□□□□ -2.01
snR54snR54 YER078W-AQ3E7A2 54 aa2.49□□□□□ -2.01
snR54snR54 HSH49Q99181 213 aaPredicted RBP2.49□□□□□ -2.01
snR54snR54 PEP4P07267 405 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms