RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN7	YPR108W	COS2	P0CX12	379 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	COS3	P0CX13	379 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	RDS2	P19541	446 aa	Known RBP	5.76	□□□□□ -1.49
RPN7	YPR108W	BUB2	P26448	306 aa	Predicted RBP	5.76	□□□□□ -1.49
RPN7	YPR108W	AAR2	P32357	355 aa	Predicted RBP	5.76	□□□□□ -1.49
RPN7	YPR108W	YME2	P32843	850 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	SPC42	P36094	363 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	GLG1	P36143	616 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	RIM11	P38615	370 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	MUP3	P38734	546 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	DSS1	P39112	969 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	DHH1	P39517	506 aa	Known RBP	5.76	□□□□□ -1.49
RPN7	YPR108W	UTP18	P40362	594 aa	Predicted RBP	5.76	□□□□□ -1.49
RPN7	YPR108W	MAM33	P40513	266 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	SNL1	P40548	159 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	CHS6	P40955	746 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	COS4	P43542	379 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	GPI8	P49018	411 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	SHE4	P51534	789 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	COQ6	P53318	479 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	YPL014W	Q02606	381 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	EFR3	Q03653	782 aa	Known RBP	5.76	□□□□□ -1.49
RPN7	YPR108W	CLU1	Q03690	1277 aa	Known RBP	5.76	□□□□□ -1.49
RPN7	YPR108W	PEX12	Q04370	399 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	ENT4	Q07872	247 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	YDR056C	Q12025	205 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	YLR049C	Q12110	428 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
RPN7	YPR108W	UBX3	Q12229	455 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	YMR030W-A	Q3E760	96 aa		5.76	□□□□□ -1.49
RPN7	YPR108W	ATP6	P00854	259 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
RPN7	YPR108W	ART10	P18634	518 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	SIR1	P21691	654 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	RBK1	P25332	333 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	PEX34	P25584	144 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	PUP2	P32379	260 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	ISF1	P32488	338 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	SPS19	P32573	292 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	PEP7	P32609	515 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	GDA1	P32621	518 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	PEX2	P32800	271 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	TIP20	P33891	701 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	MDJ1	P35191	511 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	YKR015C	P36111	568 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	CAF4	P36130	643 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	RPF2	P36160	344 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	YBR056W	P38081	501 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	YHR131C	P38835	850 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	RBG1	P39729	369 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	COA1	P40452	197 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	KTR7	P40504	517 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	GCD10	P41814	478 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	GYP8	P43570	497 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	LSB3	P43603	459 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	MET12	P46151	657 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	AIM23	P47015	356 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	TY4A-J	P47023	414 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	EMC2	P47133	292 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	KEL2	P50090	882 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	AIF1	P52923	378 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	ARI1	P53111	347 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	YNR068C	P53754	272 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	IPI3	P53877	555 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	OSH6	Q02201	448 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	LEE1	Q02799	301 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	HER2	Q03557	464 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	TAF12	Q03761	539 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	SEG1	Q04279	960 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	RSA3	Q05942	220 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	YCS4	Q06156	1176 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	CDA1	Q06702	301 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	ESA1	Q08649	445 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	YLL054C	Q12244	843 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	RPN5	Q12250	445 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	RRP42	Q12277	265 aa	Predicted RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	DBP10	Q12389	995 aa	Known RBP	5.75	□□□□□ -1.49
RPN7	YPR108W	MDM12	Q92328	271 aa		5.75	□□□□□ -1.49
RPN7	YPR108W	PRC1	P00729	532 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	SEC53	P07283	254 aa	Known RBP	5.74	□□□□□ -1.49
RPN7	YPR108W	LAT1	P12695	482 aa	Known RBP	5.74	□□□□□ -1.49
RPN7	YPR108W	YAK1	P14680	807 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	PPH22	P23595	377 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	PHO84	P25297	587 aa	Known RBP	5.74	□□□□□ -1.49
RPN7	YPR108W	DMC1	P25453	334 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	YCR099C	P25657	155 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	YSC84	P32793	468 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	AST1	P35183	429 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	LHS1	P36016	881 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	BMT2	P38278	337 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	YLF2	P38746	405 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	SSN3	P39073	555 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	EMP65	P40085	556 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	AYR1	P40471	297 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	GTS1	P40956	396 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	PYK2	P52489	506 aa	Known RBP	5.74	□□□□□ -1.49
RPN7	YPR108W	MDM34	P53083	459 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	TIM13	P53299	105 aa		5.74	□□□□□ -1.49
RPN7	YPR108W	TRM112	P53738	135 aa	Predicted RBP	5.74	□□□□□ -1.49
RPN7	YPR108W	ESF2	P53743	316 aa	Known RBP	5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms