RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	ARC1	P46672	376 aa	Known RBP	4.84	□□□□□ -1.63
YDC1	YPL087W	AAD10	P47182	288 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	LYS20	P48570	428 aa	Known RBP	4.84	□□□□□ -1.63
YDC1	YPL087W	RSC1	P53236	928 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	LSC1	P53598	329 aa	Known RBP	4.84	□□□□□ -1.63
YDC1	YPL087W	YNL234W	P53857	426 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	YNL181W	P53878	407 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	YVH1	Q02256	364 aa	Known RBP	4.84	□□□□□ -1.63
YDC1	YPL087W	INA17	Q02888	182 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	NUP53	Q03790	475 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	SNO4	Q04902	237 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	HSP33	Q08914	237 aa	Known RBP	4.84	□□□□□ -1.63
YDC1	YPL087W	HSP32	Q08992	237 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	YOL087C	Q99247	1116 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	PEP3	P27801	918 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	ALY1	P36117	915 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	AGP2	P38090	596 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	DIA4	P38705	446 aa	Predicted RBP	4.83	□□□□□ -1.64
YDC1	YPL087W	GND1	P38720	489 aa	Known RBP	4.83	□□□□□ -1.64
YDC1	YPL087W	PSD1	P39006	500 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	YFR020W	P43600	232 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	ASI1	P54074	624 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	ERO1	Q03103	563 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	SNA4	Q07549	140 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	PSR1	Q07800	427 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	BUD7	Q08754	746 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	YPL150W	Q12152	901 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	RRI2	Q12348	645 aa		4.83	□□□□□ -1.64
YDC1	YPL087W	CYB2	P00175	591 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	CHO1	P08456	276 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	MATALPHA2	P0CY08	210 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	HMLALPHA2	P0CY09	210 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	CDC24	P11433	854 aa	Predicted RBP	4.82	□□□□□ -1.64
YDC1	YPL087W	SPC110	P32380	944 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	MPE1	P35728	441 aa	Known RBP	4.82	□□□□□ -1.64
YDC1	YPL087W	MRPL10	P36520	322 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	SEC24	P40482	926 aa	Known RBP	4.82	□□□□□ -1.64
YDC1	YPL087W	YGL082W	P53155	381 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	MLH2	Q07980	695 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	SRL1	Q08673	210 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	TCO89	Q08921	799 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	TAH18	Q12181	623 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	INP53	Q12271	1107 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	NKP1	Q12493	238 aa		4.82	□□□□□ -1.64
YDC1	YPL087W	NOP58	Q12499	511 aa	Known RBP	4.82	□□□□□ -1.64
YDC1	YPL087W	DDP1	Q99321	188 aa	Known RBP	4.82	□□□□□ -1.64
YDC1	YPL087W	VMA16	P23968	213 aa		4.81	□□□□□ -1.64
YDC1	YPL087W	PDB1	P32473	366 aa	Known RBP	4.81	□□□□□ -1.64
YDC1	YPL087W	MIA40	P36046	403 aa		4.81	□□□□□ -1.64
YDC1	YPL087W	IAH1	P41734	238 aa		4.81	□□□□□ -1.64
YDC1	YPL087W	IZH1	Q03419	316 aa		4.81	□□□□□ -1.64
YDC1	YPL087W	YLR112W	Q12130	139 aa		4.81	□□□□□ -1.64
YDC1	YPL087W	FAS2	P19097	1887 aa	Known RBP	4.8	□□□□□ -1.64
YDC1	YPL087W	YPT1	P01123	206 aa	Known RBP	4.8	□□□□□ -1.64
YDC1	YPL087W	CBP1	P07252	654 aa		4.8	□□□□□ -1.64
YDC1	YPL087W	GAC1	P28006	793 aa		4.8	□□□□□ -1.64
YDC1	YPL087W	YKT6	P36015	200 aa	Known RBP	4.8	□□□□□ -1.64
YDC1	YPL087W	MNN2	P38069	597 aa		4.8	□□□□□ -1.64
YDC1	YPL087W	RFT1	P38206	574 aa	Predicted RBP	4.8	□□□□□ -1.64
YDC1	YPL087W	UBX2	Q04228	584 aa		4.8	□□□□□ -1.64
YDC1	YPL087W	CIR2	Q08822	631 aa		4.8	□□□□□ -1.64
YDC1	YPL087W	YOR111W	Q99210	232 aa		4.8	□□□□□ -1.64
YDC1	YPL087W	TAO3	P40468	2376 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	QCR6	P00127	147 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	LCB1	P25045	558 aa	Known RBP	4.79	□□□□□ -1.64
YDC1	YPL087W	ADH7	P25377	361 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	SNU114	P36048	1008 aa	Known RBP	4.79	□□□□□ -1.64
YDC1	YPL087W	YPK3	P38070	525 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	TCD1	P38756	429 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	BUR6	P40096	142 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	YIL152W	P40455	235 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	SGF73	P53165	657 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	YNR061C	P53747	219 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	ARP9	Q05123	467 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	GRS2	Q06817	618 aa		4.79	□□□□□ -1.64
YDC1	YPL087W	IMP2'	P32351	346 aa		4.78	□□□□□ -1.64
YDC1	YPL087W	MAL33	P38157	468 aa		4.78	□□□□□ -1.64
YDC1	YPL087W	YBL029W	P38201	376 aa		4.78	□□□□□ -1.64
YDC1	YPL087W	ARC40	P38328	384 aa	Known RBP	4.78	□□□□□ -1.64
YDC1	YPL087W	RTS1	P38903	757 aa		4.78	□□□□□ -1.64
YDC1	YPL087W	SIP4	P46954	829 aa		4.78	□□□□□ -1.64
YDC1	YPL087W	DIA3	P52290	468 aa		4.78	□□□□□ -1.64
YDC1	YPL087W	YTP1	P53584	459 aa		4.78	□□□□□ -1.64
YDC1	YPL087W	INN1	P53901	409 aa		4.78	□□□□□ -1.64
YDC1	YPL087W	SYF1	Q04048	859 aa	Predicted RBP	4.78	□□□□□ -1.64
YDC1	YPL087W	RPL42A	P0CX27	106 aa	Known RBP	4.77	□□□□□ -1.65
YDC1	YPL087W	RPL42B	P0CX28	106 aa	Known RBP	4.77	□□□□□ -1.65
YDC1	YPL087W	RDS1	P25611	832 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	BMH2	P34730	273 aa	Known RBP	4.77	□□□□□ -1.65
YDC1	YPL087W	PES4	P39684	611 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	YIL169C	P40442	995 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	SAD1	P43589	448 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	PIB2	P53191	635 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	RTC4	P53850	401 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	TRM44	Q02648	567 aa	Known RBP	4.77	□□□□□ -1.65
YDC1	YPL087W	YMR254C	Q04838	102 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	RSF1	Q05043	376 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	YMR034C	Q05131	434 aa	Predicted RBP	4.77	□□□□□ -1.65
YDC1	YPL087W	ATG9	Q12142	997 aa		4.77	□□□□□ -1.65
YDC1	YPL087W	LEU9	Q12166	604 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms