RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W CTF3Q12748 733 aa1.27□□□□□ -2.21
SGF11YPL047W YOR019WQ99248 730 aa1.27□□□□□ -2.21
SGF11YPL047W YBR085C-AO43137 85 aa1.26□□□□□ -2.21
SGF11YPL047W RPB2P08518 1224 aaKnown RBP1.26□□□□□ -2.21
SGF11YPL047W PHO81P17442 1178 aa1.26□□□□□ -2.21
SGF11YPL047W BUD5P25300 642 aaPredicted RBP1.26□□□□□ -2.21
SGF11YPL047W ARO2P28777 376 aaKnown RBP1.26□□□□□ -2.21
SGF11YPL047W MRP4P32902 394 aa1.26□□□□□ -2.21
SGF11YPL047W TSC10P38342 320 aa1.26□□□□□ -2.21
SGF11YPL047W BUR6P40096 142 aa1.26□□□□□ -2.21
SGF11YPL047W YIL067CP40514 678 aa1.26□□□□□ -2.21
SGF11YPL047W IME4P41833 600 aa1.26□□□□□ -2.21
SGF11YPL047W ALT2P52892 507 aa1.26□□□□□ -2.21
SGF11YPL047W ERG26P53199 349 aaKnown RBP1.26□□□□□ -2.21
SGF11YPL047W DUG3P53871 357 aa1.26□□□□□ -2.21
SGF11YPL047W RSM23Q01163 450 aa1.26□□□□□ -2.21
SGF11YPL047W MUB1Q03162 620 aa1.26□□□□□ -2.21
SGF11YPL047W RCO1Q04779 684 aa1.26□□□□□ -2.21
SGF11YPL047W MRPL51Q06090 140 aaPredicted RBP1.26□□□□□ -2.21
SGF11YPL047W PSK2Q08217 1101 aa1.26□□□□□ -2.21
SGF11YPL047W RPS10AQ08745 105 aaPredicted RBP1.26□□□□□ -2.21
SGF11YPL047W ERV2Q12284 196 aa1.26□□□□□ -2.21
SGF11YPL047W ERG8P24521 451 aa1.25□□□□□ -2.21
SGF11YPL047W RNA14P25298 677 aaKnown RBP1.25□□□□□ -2.21
SGF11YPL047W RVS161P25343 265 aaKnown RBP1.25□□□□□ -2.21
SGF11YPL047W RAD16P31244 790 aa1.25□□□□□ -2.21
SGF11YPL047W ELO1P39540 310 aa1.25□□□□□ -2.21
SGF11YPL047W FMP10P40098 244 aa1.25□□□□□ -2.21
SGF11YPL047W PIL1P53252 339 aaKnown RBP1.25□□□□□ -2.21
SGF11YPL047W SHY1P53266 389 aa1.25□□□□□ -2.21
SGF11YPL047W IRC15Q02733 499 aa1.25□□□□□ -2.21
SGF11YPL047W SHR3Q02774 210 aa1.25□□□□□ -2.21
SGF11YPL047W YMR027WQ04371 470 aa1.25□□□□□ -2.21
SGF11YPL047W VPS74Q06385 345 aa1.25□□□□□ -2.21
SGF11YPL047W RTT109Q07794 436 aa1.25□□□□□ -2.21
SGF11YPL047W RBD2Q12270 262 aa1.25□□□□□ -2.21
SGF11YPL047W PCD1Q12524 340 aa1.25□□□□□ -2.21
SGF11YPL047W ADH2P00331 348 aaKnown RBP1.24□□□□□ -2.21
SGF11YPL047W NUC1P08466 329 aa1.24□□□□□ -2.21
SGF11YPL047W PEP5P12868 1029 aa1.24□□□□□ -2.21
SGF11YPL047W HEM15P16622 393 aa1.24□□□□□ -2.21
SGF11YPL047W ADH7P25377 361 aa1.24□□□□□ -2.21
SGF11YPL047W SGF29P25554 259 aa1.24□□□□□ -2.21
SGF11YPL047W FRE1P32791 686 aa1.24□□□□□ -2.21
SGF11YPL047W MTR2P34232 184 aaKnown RBP1.24□□□□□ -2.21
SGF11YPL047W UTH1P36135 365 aa1.24□□□□□ -2.21
SGF11YPL047W IFA38P38286 347 aa1.24□□□□□ -2.21
SGF11YPL047W PSD1P39006 500 aa1.24□□□□□ -2.21
SGF11YPL047W HAT2P39984 401 aa1.24□□□□□ -2.21
SGF11YPL047W SLZ1P40167 298 aa1.24□□□□□ -2.21
SGF11YPL047W SEC24P40482 926 aaKnown RBP1.24□□□□□ -2.21
SGF11YPL047W ELP2P42935 788 aa1.24□□□□□ -2.21
SGF11YPL047W SCD6P45978 349 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
SGF11YPL047W REG1Q00816 1014 aa1.24□□□□□ -2.21
SGF11YPL047W ESA1Q08649 445 aa1.24□□□□□ -2.21
SGF11YPL047W LEU9Q12166 604 aaKnown RBP1.24□□□□□ -2.21
SGF11YPL047W CCH1P50077 2039 aa1.23□□□□□ -2.21
SGF11YPL047W EXO70P19658 623 aa1.23□□□□□ -2.21
SGF11YPL047W YCR007CP25354 239 aa1.23□□□□□ -2.21
SGF11YPL047W HCS1P34243 683 aa1.23□□□□□ -2.21
SGF11YPL047W YKL100CP34248 587 aa1.23□□□□□ -2.21
SGF11YPL047W MID2P36027 376 aa1.23□□□□□ -2.21
SGF11YPL047W YKL023WP36103 277 aaKnown RBP1.23□□□□□ -2.21
SGF11YPL047W RIC1P40395 1056 aa1.23□□□□□ -2.21
SGF11YPL047W REE1P40893 198 aa1.23□□□□□ -2.21
SGF11YPL047W YJR154WP47181 346 aa1.23□□□□□ -2.21
SGF11YPL047W AAD10P47182 288 aa1.23□□□□□ -2.21
SGF11YPL047W APT1P49435 187 aaKnown RBP1.23□□□□□ -2.21
SGF11YPL047W DIA3P52290 468 aa1.23□□□□□ -2.21
SGF11YPL047W RRT6P53117 311 aaPredicted RBP1.23□□□□□ -2.21
SGF11YPL047W UBX4P54730 416 aa1.23□□□□□ -2.21
SGF11YPL047W HAL1Q01766 294 aa1.23□□□□□ -2.21
SGF11YPL047W BLS1Q06071 122 aa1.23□□□□□ -2.21
SGF11YPL047W SKG3Q06315 1026 aa1.23□□□□□ -2.21
SGF11YPL047W TEN1Q07921 160 aa1.23□□□□□ -2.21
SGF11YPL047W SUC2P00724 532 aa1.22□□□□□ -2.21
SGF11YPL047W PFK2P16862 959 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
SGF11YPL047W PWP1P21304 576 aaKnown RBP1.22□□□□□ -2.21
SGF11YPL047W SGV1P23293 657 aaKnown RBP1.22□□□□□ -2.21
SGF11YPL047W PCL1P24867 279 aa1.22□□□□□ -2.21
SGF11YPL047W PUP3P25451 205 aaKnown RBP1.22□□□□□ -2.21
SGF11YPL047W MRP20P32387 263 aa1.22□□□□□ -2.21
SGF11YPL047W SDH3P33421 198 aa1.22□□□□□ -2.21
SGF11YPL047W TOM20P35180 183 aa1.22□□□□□ -2.21
SGF11YPL047W TEF4P36008 412 aaKnown RBP1.22□□□□□ -2.21
SGF11YPL047W NUP133P36161 1157 aa1.22□□□□□ -2.21
SGF11YPL047W GRX7P38068 203 aa1.22□□□□□ -2.21
SGF11YPL047W MRP21P38175 177 aa1.22□□□□□ -2.21
SGF11YPL047W YHR210CP38893 341 aa1.22□□□□□ -2.21
SGF11YPL047W TMA108P40462 946 aa1.22□□□□□ -2.21
SGF11YPL047W PTR3P43606 678 aa1.22□□□□□ -2.21
SGF11YPL047W BNA1P47096 177 aa1.22□□□□□ -2.21
SGF11YPL047W RPS7BP48164 190 aaKnown RBP1.22□□□□□ -2.21
SGF11YPL047W CAF40P53829 373 aa1.22□□□□□ -2.21
SGF11YPL047W EFM6P53970 246 aa1.22□□□□□ -2.21
SGF11YPL047W PIR3Q03180 325 aa1.22□□□□□ -2.21
SGF11YPL047W SLD5Q03406 294 aa1.22□□□□□ -2.21
SGF11YPL047W IVY1Q04934 453 aa1.22□□□□□ -2.21
SGF11YPL047W MRPL35Q06678 367 aa1.22□□□□□ -2.21
SGF11YPL047W YOR365CQ08844 703 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms