RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W REV7P38927 245 aa3.79□□□□□ -1.8
ROD1YOR018W MPT5P39016 859 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
ROD1YOR018W AXL1P40851 1208 aa3.79□□□□□ -1.8
ROD1YOR018W AZF1P41696 914 aa3.79□□□□□ -1.8
ROD1YOR018W SET2P46995 733 aaKnown RBP3.79□□□□□ -1.8
ROD1YOR018W TMA22P47089 198 aaPredicted RBP3.79□□□□□ -1.8
ROD1YOR018W PPT1P53043 513 aa3.79□□□□□ -1.8
ROD1YOR018W MRM2P53123 320 aa3.79□□□□□ -1.8
ROD1YOR018W PEX8P53248 589 aa3.79□□□□□ -1.8
ROD1YOR018W YTP1P53584 459 aa3.79□□□□□ -1.8
ROD1YOR018W ALG12P53730 551 aa3.79□□□□□ -1.8
ROD1YOR018W CWC24P53769 259 aa3.79□□□□□ -1.8
ROD1YOR018W YDR444WQ04093 687 aa3.79□□□□□ -1.8
ROD1YOR018W HPT1Q04178 221 aaKnown RBP3.79□□□□□ -1.8
ROD1YOR018W RSC3Q06639 885 aa3.79□□□□□ -1.8
ROD1YOR018W TRP3P00937 484 aa3.78□□□□□ -1.8
ROD1YOR018W DST1P07273 309 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-LR4P0C2I8 440 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W TY1A-DR6P0CX70 440 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-ER1P0CX71 440 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-LR2P0CX72 440 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-PLP0CX73 440 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-JR1P0CX74 440 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-LR3P0CX75 440 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-ML2P0CX76 440 aa3.78□□□□□ -1.8
ROD1YOR018W ABF1P14164 731 aa3.78□□□□□ -1.8
ROD1YOR018W AMD2P22580 549 aa3.78□□□□□ -1.8
ROD1YOR018W MNE1P24720 663 aa3.78□□□□□ -1.8
ROD1YOR018W TOM20P35180 183 aa3.78□□□□□ -1.8
ROD1YOR018W DHH1P39517 506 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W YJR061WP40355 935 aa3.78□□□□□ -1.8
ROD1YOR018W SPC105P53148 917 aa3.78□□□□□ -1.8
ROD1YOR018W LSM3P57743 89 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W UBP2Q01476 1272 aa3.78□□□□□ -1.8
ROD1YOR018W YMR178WQ03219 274 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W TVP15Q03860 143 aa3.78□□□□□ -1.8
ROD1YOR018W TAF11Q04226 346 aa3.78□□□□□ -1.8
ROD1YOR018W BLS1Q06071 122 aa3.78□□□□□ -1.8
ROD1YOR018W LCB5Q06147 687 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W ADY3Q07732 790 aa3.78□□□□□ -1.8
ROD1YOR018W YEH2Q07950 538 aa3.78□□□□□ -1.8
ROD1YOR018W TRM8Q12009 286 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-GR1Q12085 440 aa3.78□□□□□ -1.8
ROD1YOR018W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W TY1A-OLQ92392 440 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W LEU4P06208 619 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W TUB1P09733 447 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W SBP1P10080 294 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W PMR1P13586 950 aa3.78□□□□□ -1.8
ROD1YOR018W HSC82P15108 705 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W RSC6P25632 483 aa3.78□□□□□ -1.8
ROD1YOR018W MSH2P25847 964 aa3.78□□□□□ -1.8
ROD1YOR018W CIN8P27895 1000 aa3.78□□□□□ -1.8
ROD1YOR018W DGR2P32330 852 aa3.78□□□□□ -1.8
ROD1YOR018W ATP11P32453 318 aa3.78□□□□□ -1.8
ROD1YOR018W PMT1P33775 817 aa3.78□□□□□ -1.8
ROD1YOR018W SKT5P34226 696 aa3.78□□□□□ -1.8
ROD1YOR018W CTF13P35203 478 aa3.78□□□□□ -1.8
ROD1YOR018W YBL029WP38201 376 aa3.78□□□□□ -1.8
ROD1YOR018W GIP4P39732 760 aa3.78□□□□□ -1.8
ROD1YOR018W HAT2P39984 401 aa3.78□□□□□ -1.8
ROD1YOR018W ARB1P40024 610 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W LSM5P40089 93 aaKnown RBP3.78□□□□□ -1.8
ROD1YOR018W COA1P40452 197 aa3.78□□□□□ -1.8
ROD1YOR018W LSB6P42951 607 aa3.78□□□□□ -1.8
ROD1YOR018W BFA1P47113 574 aa3.78□□□□□ -1.8
ROD1YOR018W SGF73P53165 657 aa3.78□□□□□ -1.8
ROD1YOR018W CLD1P53264 445 aa3.78□□□□□ -1.8
ROD1YOR018W VAM6Q07468 1049 aa3.78□□□□□ -1.8
ROD1YOR018W YPR202WQ08993 238 aa3.78□□□□□ -1.8
ROD1YOR018W FPR1P20081 114 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W YCK2P23292 546 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W CDC10P25342 322 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W YCR090CP25654 182 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W PXA2P34230 853 aa3.77□□□□□ -1.81
ROD1YOR018W CTP1P38152 299 aa3.77□□□□□ -1.81
ROD1YOR018W TRM5P38793 499 aa3.77□□□□□ -1.81
ROD1YOR018W OSW5P40219 148 aa3.77□□□□□ -1.81
ROD1YOR018W UTP18P40362 594 aaPredicted RBP3.77□□□□□ -1.81
ROD1YOR018W HPM1P40481 377 aa3.77□□□□□ -1.81
ROD1YOR018W IST1P53843 298 aaPredicted RBP3.77□□□□□ -1.81
ROD1YOR018W GSF2Q04697 403 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W SEC10Q06245 871 aa3.77□□□□□ -1.81
ROD1YOR018W ESA1Q08649 445 aa3.77□□□□□ -1.81
ROD1YOR018W GPB1Q08886 897 aa3.77□□□□□ -1.81
ROD1YOR018W YLR049CQ12110 428 aa3.77□□□□□ -1.81
ROD1YOR018W HUA2Q12134 243 aa3.77□□□□□ -1.81
ROD1YOR018W NOT5Q12514 560 aaPredicted RBP3.77□□□□□ -1.81
ROD1YOR018W NAG1Q8TGN9 163 aa3.77□□□□□ -1.81
ROD1YOR018W UBA1P22515 1024 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W NIP1P32497 812 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W TCD2P36101 447 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W NEM1P38757 446 aa3.77□□□□□ -1.81
ROD1YOR018W YGL176CP46945 554 aa3.77□□□□□ -1.81
ROD1YOR018W FLC3P53121 802 aa3.77□□□□□ -1.81
ROD1YOR018W IMP4P53941 290 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W EFM6P53970 246 aa3.77□□□□□ -1.81
ROD1YOR018W ARX1Q03862 593 aaKnown RBP3.77□□□□□ -1.81
ROD1YOR018W RAD34Q06665 692 aa3.77□□□□□ -1.81
ROD1YOR018W ASA1Q06822 443 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms