RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	LPD1	P09624	499 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	YML002W	P0CF17	737 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	FUB1	P25659	250 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	SMY1	P32364	656 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	RIB7	P33312	244 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	TOD6	P34219	525 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	SLM4	P38247	162 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	ELO3	P40319	345 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	CCT7	P42943	550 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	LAM5	P43560	674 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	RPS7B	P48164	190 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	HST1	P53685	503 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	PDR16	P53860	351 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	ALF1	P53904	254 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	YOR1	P53049	1477 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	SRB8	P25648	1427 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	HEM1	P09950	548 aa	Predicted RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	RPL3	P14126	387 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	STE4	P18851	423 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	RPB4	P20433	221 aa	Predicted RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	SEC14	P24280	304 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	ELO2	P25358	347 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	PUP3	P25451	205 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	CCL1	P37366	393 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	DIA4	P38705	446 aa	Predicted RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	SEC31	P38968	1273 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	STB2	P46679	850 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	GCD14	P46959	383 aa	Predicted RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	YJL163C	P46996	555 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	DIP5	P53388	608 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	BUD17	P53727	317 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	FMP30	Q02883	468 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	KRE28	Q04431	385 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	SML1	Q04964	104 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	YDL144C	Q07589	356 aa		3.48	□□□□□ -1.85
FRE4	YNR060W	NOP6	Q07623	225 aa	Known RBP	3.48	□□□□□ -1.85
FRE4	YNR060W	CHO2	P05374	869 aa	Known RBP	3.47	□□□□□ -1.85
FRE4	YNR060W	SUI2	P20459	304 aa	Known RBP	3.47	□□□□□ -1.85
FRE4	YNR060W	VMA16	P23968	213 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	CAD1	P24813	409 aa	Known RBP	3.47	□□□□□ -1.85
FRE4	YNR060W	CDC15	P27636	974 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	AFG1	P32317	509 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	UGP1	P32861	499 aa	Known RBP	3.47	□□□□□ -1.85
FRE4	YNR060W	YBR144C	P34215	104 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	RRP1	P35178	278 aa	Predicted RBP	3.47	□□□□□ -1.85
FRE4	YNR060W	OSH3	P38713	996 aa	Known RBP	3.47	□□□□□ -1.85
FRE4	YNR060W	TCD1	P38756	429 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	PET100	P38958	111 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	IRC8	P47046	822 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	VPS73	P53142	486 aa	Known RBP	3.47	□□□□□ -1.85
FRE4	YNR060W	ARP5	P53946	755 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	UBP16	Q02863	499 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	DLT1	Q04216	342 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	RBA50	Q04418	439 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	FUS2	Q05670	677 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	TMA10	Q06177	86 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	DCI1	Q08558	271 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	RIO1	Q12196	484 aa	Known RBP	3.47	□□□□□ -1.85
FRE4	YNR060W	LCB4	Q12246	624 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	TAF3	Q12297	353 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	SMC4	Q12267	1418 aa		3.47	□□□□□ -1.85
FRE4	YNR060W	MF(ALPHA)1	P01149	165 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	YPK1	P12688	680 aa	Known RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	ARO3	P14843	370 aa	Known RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	KRS1	P15180	591 aa	Known RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	GEX1	P25596	615 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	CRM1	P30822	1084 aa	Known RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	SNU114	P36048	1008 aa	Known RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	GDT1	P38301	280 aa	Predicted RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	MLH1	P38920	769 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	UIP3	P39547	235 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	SAP1	P39955	897 aa	Known RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	PHM8	P40025	321 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	BUR6	P40096	142 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	ALG5	P40350	334 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	CHS6	P40955	746 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	YJL107C	P42947	387 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	YIP4	P53093	235 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	CAF130	P53280	1122 aa	Predicted RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	RHO5	P53879	331 aa	Known RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	ADE16	P54113	591 aa	Known RBP	3.46	□□□□□ -1.85
FRE4	YNR060W	ACL4	Q03771	387 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	YLH47	Q06493	454 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	YPL216W	Q08964	1102 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	YDL007C-A	Q2V2Q0	85 aa		3.46	□□□□□ -1.85
FRE4	YNR060W	AAC1	P04710	309 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	HIP1	P06775	603 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	SEN2	P16658	377 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	ADH7	P25377	361 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	NIP1	P32497	812 aa	Known RBP	3.46	□□□□□ -1.86
FRE4	YNR060W	PTR2	P32901	601 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	HCS1	P34243	683 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	ELO1	P39540	310 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	TIF4631	P39935	952 aa	Known RBP	3.46	□□□□□ -1.86
FRE4	YNR060W	ECM10	P39987	644 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	FMP52	P40008	231 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	STU2	P46675	888 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	AVT1	P47082	602 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	EFM3	P47163	339 aa		3.46	□□□□□ -1.86
FRE4	YNR060W	DCP2	P53550	970 aa	Known RBP	3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms