RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	1.48	□□□□□ -2.17	not detected
SSK2	YNR031C	RPO26	P20435	155 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	CKI1	P20485	582 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	SLY1	P22213	666 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	PHO91	P27514	894 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	NUD1	P32336	851 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MCM10	P32354	571 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	FRE1	P32791	686 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MNL1	P38888	796 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	UIP3	P39547	235 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YAR028W	P39548	234 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YHB1	P39676	399 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	PCL7	P40186	285 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	CCT5	P40413	562 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	YIL161W	P40449	235 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	YIL067C	P40514	678 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	CCT7	P42943	550 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	PET130	P47065	347 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YGL108C	P53139	140 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	PEF1	P53238	335 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	SRL4	Q03085	281 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YML131W	Q03102	365 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	HER2	Q03557	464 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YDR131C	Q03899	556 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	PPM1	Q04081	328 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YMR027W	Q04371	470 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YDR514C	Q04408	483 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	GRE1	Q08969	168 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	DIN7	Q12086	430 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	POL2	P21951	2222 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	HIS1	P00498	297 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	CDC9	P04819	755 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MIS1	P09440	975 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	RPB5	P20434	215 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	UBC1	P21734	215 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	1.48	□□□□□ -2.17	not detected
SSK2	YNR031C	LST4	P34239	828 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	TSA1	P34760	196 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	OAR1	P35731	278 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	SRX1	P36077	127 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	HEL1	P36113	551 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	ATP3	P38077	311 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	ARA1	P38115	344 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YBR062C	P38239	180 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	TSL1	P38427	1098 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	RIM11	P38615	370 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YHL012W	P38709	493 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	GND1	P38720	489 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	VMA22	P38784	181 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	ERP5	P38819	212 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	BAT1	P38891	393 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	ALP1	P38971	573 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	NUP60	P39705	539 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	AIM10	P39965	576 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	HXT10	P43581	546 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	RMD8	P43620	662 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MET12	P46151	657 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	PRP31	P49704	494 aa	Predicted RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	LCL3	P53153	274 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	UTP8	P53276	713 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	TNA1	P53322	534 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	SKI8	Q02793	397 aa	Predicted RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	ABZ2	Q03266	374 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	FIN1	Q03898	291 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	ECM38	Q05902	660 aa	Predicted RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	RSC3	Q06639	885 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	CRD1	Q07560	283 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YLL007C	Q07799	665 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	1.48	□□□□□ -2.17	not detected
SSK2	YNR031C	CHS5	Q12114	671 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	LEU9	Q12166	604 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	YDR061W	Q12298	539 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	NPC2	Q12408	173 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	TAD3	Q9URQ3	322 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	PUT2	P07275	575 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	SEC53	P07283	254 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	RPL4A	P10664	362 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	RPB10	P22139	70 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	PEX34	P25584	144 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	CDC15	P27636	974 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	DOA4	P32571	926 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	SUR1	P33300	382 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	LOT5	P34234	306 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	EMC3	P36039	253 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	TVP38	P36164	337 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MRPL17	P36528	281 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	TSC10	P38342	320 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	1.48	□□□□□ -2.17	not detected
SSK2	YNR031C	MED6	P38782	295 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	LSM12	P38828	187 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	SKN7	P38889	622 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	REV7	P38927	245 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MIT1	P40002	666 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	RGI2	P40188	164 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MND2	P40577	368 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	ERG10	P41338	398 aa	Known RBP	1.48	□□□□□ -2.17
SSK2	YNR031C	MRPS18	P42847	217 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MIC19	P43594	170 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YJR056C	P47115	236 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	RPL4B	P49626	362 aa	Known RBP	1.48	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms