RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC2	YNL272C	SHR3	Q02774	210 aa		4.06	□□□□□ -1.76
SEC2	YNL272C	USA1	Q03714	838 aa		4.06	□□□□□ -1.76
SEC2	YNL272C	STE23	Q06010	1027 aa		4.06	□□□□□ -1.76
SEC2	YNL272C	CMS1	Q07897	291 aa	Known RBP	4.06	□□□□□ -1.76
SEC2	YNL272C	PER33	Q12144	273 aa		4.06	□□□□□ -1.76
SEC2	YNL272C	NPC2	Q12408	173 aa		4.06	□□□□□ -1.76
SEC2	YNL272C	MPD2	Q99316	277 aa		4.06	□□□□□ -1.76
SEC2	YNL272C	ERG20	P08524	352 aa	Known RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	ILS1	P09436	1072 aa	Known RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	CLN1	P20437	546 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	MRPL25	P23369	157 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	DCC1	P25559	380 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	PCL2	P25693	308 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	HEM12	P32347	362 aa	Predicted RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	MUD2	P36084	527 aa	Known RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	ALY1	P36117	915 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	CRP1	P38845	465 aa	Known RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	CTF8	P38877	133 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	SDP1	P40479	209 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	DPH1	P40487	425 aa	Known RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	IST3	P40565	148 aa	Predicted RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	RLP7	P40693	322 aa	Known RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	SAP4	P53036	818 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	EMC4	P53073	190 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	STR3	P53101	465 aa	Known RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	VAC7	P53950	1165 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	NUP100	Q02629	959 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	TMA10	Q06177	86 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	CUE5	Q08412	411 aa	Known RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	SLD7	Q08457	257 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	TRE2	Q08693	809 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	CET1	O13297	549 aa	Predicted RBP	4.05	□□□□□ -1.76
SEC2	YNL272C	OSW5	P40219	148 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	RAD26	P40352	1085 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	FLC3	P53121	802 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	MET14	Q02196	202 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	TRS31	Q03337	283 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	SFH1	Q06168	426 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	YET3	Q07451	203 aa		4.05	□□□□□ -1.76
SEC2	YNL272C	SEC63	P14906	663 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	FPR1	P20081	114 aa	Known RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	YSP3	P25036	478 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	ILV6	P25605	309 aa	Known RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	AEP1	P32493	518 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	PXA2	P34230	853 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	ETR1	P38071	380 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	ARP1	P38696	384 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	RGI2	P40188	164 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	TES1	P41903	349 aa	Known RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	BUD13	P46947	266 aa	Predicted RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	SIP4	P46954	829 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	MNT2	P53059	558 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	NPY1	P53164	384 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	PRM1	P53835	661 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	KTR5	P53966	522 aa	Predicted RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	RPN9	Q04062	393 aa	Known RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	BUD22	Q04347	519 aa	Known RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	YPR114W	Q06107	315 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	CLP1	Q08685	445 aa	Predicted RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	RUD3	Q12234	484 aa	Known RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	ILV2	P07342	687 aa	Known RBP	4.04	□□□□□ -1.76
SEC2	YNL272C	GPA2	P10823	449 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	PMA2	P19657	947 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	MNE1	P24720	663 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	SED4	P25365	1065 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	BEM1	P29366	551 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	SMI1	P32566	505 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	GDA1	P32621	518 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	SER33	P40510	469 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	PXA1	P41909	870 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	IPI3	P53877	555 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	NHX1	Q04121	633 aa		4.04	□□□□□ -1.76
SEC2	YNL272C	RAD3	P06839	778 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	SSC1	P0CS90	654 aa	Known RBP	4.03	□□□□□ -1.76
SEC2	YNL272C	NSP1	P14907	823 aa	Known RBP	4.03	□□□□□ -1.76
SEC2	YNL272C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
SEC2	YNL272C	PRP4	P20053	465 aa	Known RBP	4.03	□□□□□ -1.76
SEC2	YNL272C	ATP12	P22135	325 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	OAF3	P36023	863 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	MRP21	P38175	177 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	SPC97	P38863	823 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	MSS4	P38994	779 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	SEO1	P39709	593 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	GLG2	P47011	380 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	COG1	P53079	417 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	NOP15	P53927	220 aa	Predicted RBP	4.03	□□□□□ -1.76
SEC2	YNL272C	EFM6	P53970	246 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	SNP1	Q00916	300 aa	Predicted RBP	4.03	□□□□□ -1.76
SEC2	YNL272C	YMR178W	Q03219	274 aa	Known RBP	4.03	□□□□□ -1.76
SEC2	YNL272C	GSF2	Q04697	403 aa	Known RBP	4.03	□□□□□ -1.76
SEC2	YNL272C	GPR1	Q12361	961 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	LAS17	Q12446	633 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	MEX67	Q99257	599 aa	Known RBP	4.03	□□□□□ -1.76
SEC2	YNL272C	YLR149C	Q99296	730 aa		4.03	□□□□□ -1.76
SEC2	YNL272C	DIF1	O13577	133 aa		4.02	□□□□□ -1.77
SEC2	YNL272C	AMD1	P15274	810 aa	Known RBP	4.02	□□□□□ -1.77
SEC2	YNL272C	IMP3	P32899	183 aa	Predicted RBP	4.02	□□□□□ -1.77
SEC2	YNL272C	CTF13	P35203	478 aa		4.02	□□□□□ -1.77
SEC2	YNL272C	YBR259W	P38338	688 aa		4.02	□□□□□ -1.77
SEC2	YNL272C	YHI9	P38765	294 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms