RNA–Protein interactions for RNA: YNL207W

RIO2, Essential serine kinase involved in the processing of 20S pre-rRNA, yeast

Gene RIO2, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIO2	YNL207W	CTI6	Q08923	506 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	NMD4	Q12129	218 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	ARP6	Q12509	438 aa		2.76	□□□□□ -1.97
RIO2	YNL207W	PUT2	P07275	575 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	SNF3	P10870	884 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	MRP7	P12687	371 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	EST1	P17214	699 aa	Predicted RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	BUD5	P25300	642 aa	Predicted RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	OCA4	P25366	362 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	RPS2	P25443	254 aa	Known RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	SGF29	P25554	259 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	PAP1	P29468	568 aa	Known RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	UBP11	P36026	717 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	PHD1	P36093	366 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	YKL023W	P36103	277 aa	Known RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	RPL32	P38061	130 aa	Known RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	CIN4	P39110	191 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	RPS10B	P46784	105 aa	Known RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	YGR126W	P53274	230 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	HCR1	Q05775	265 aa	Known RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	YEH1	Q07804	573 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	RPS10A	Q08745	105 aa	Predicted RBP	2.75	□□□□□ -1.97
RIO2	YNL207W	RRI2	Q12348	645 aa		2.75	□□□□□ -1.97
RIO2	YNL207W	INH1	P01097	85 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	CBS1	P14066	229 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	HSC82	P15108	705 aa	Known RBP	2.74	□□□□□ -1.97
RIO2	YNL207W	PUP3	P25451	205 aa	Known RBP	2.74	□□□□□ -1.97
RIO2	YNL207W	YBL055C	P34220	418 aa	Predicted RBP	2.74	□□□□□ -1.97
RIO2	YNL207W	JNM1	P36224	373 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	LAG1	P38703	411 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	DIM1	P41819	318 aa	Known RBP	2.74	□□□□□ -1.97
RIO2	YNL207W	LYS4	P49367	693 aa	Predicted RBP	2.74	□□□□□ -1.97
RIO2	YNL207W	DSD1	P53095	428 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	LCL3	P53153	274 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	SHR3	Q02774	210 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	SVL3	Q03088	825 aa	Known RBP	2.74	□□□□□ -1.97
RIO2	YNL207W	YEH2	Q07950	538 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	TLG2	Q08144	397 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	YJR112W-A	Q3E743	109 aa		2.74	□□□□□ -1.97
RIO2	YNL207W	BRR1	Q99177	341 aa	Predicted RBP	2.74	□□□□□ -1.97
RIO2	YNL207W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
RIO2	YNL207W	ART10	P18634	518 aa	Known RBP	2.73	□□□□□ -1.97
RIO2	YNL207W	ACH1	P32316	526 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	YME1	P32795	747 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	UTP9	P38882	575 aa	Known RBP	2.73	□□□□□ -1.97
RIO2	YNL207W	ALK1	P43633	760 aa	Known RBP	2.73	□□□□□ -1.97
RIO2	YNL207W	PYK2	P52489	506 aa	Known RBP	2.73	□□□□□ -1.97
RIO2	YNL207W	SMM1	P53720	384 aa	Known RBP	2.73	□□□□□ -1.97
RIO2	YNL207W	IPI3	P53877	555 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	RPM2	Q02773	1202 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	FIN1	Q03898	291 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	RBA50	Q04418	439 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	YKU80	Q04437	629 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	GLO2	Q05584	274 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	VPS38	Q05919	439 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	COG4	Q06096	861 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	FMP45	Q07651	309 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	AVL9	Q12500	764 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	YPT6	Q99260	215 aa		2.73	□□□□□ -1.97
RIO2	YNL207W	FOB1	O13329	566 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	PEP5	P12868	1029 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	TYR1	P20049	452 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	SGV1	P23293	657 aa	Known RBP	2.72	□□□□□ -1.97
RIO2	YNL207W	VPS17	P32913	551 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	SWE1	P32944	819 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	SGS1	P35187	1447 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	NUP133	P36161	1157 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	YHR218W	P38899	603 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	ERP2	P39704	215 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	YJL068C	P40363	299 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	AXL1	P40851	1208 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	SNG1	P46950	547 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	UPF3	P48412	387 aa	Known RBP	2.72	□□□□□ -1.97
RIO2	YNL207W	MRX6	P48564	524 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	TDA7	P53882	636 aa	Predicted RBP	2.72	□□□□□ -1.97
RIO2	YNL207W	NGL3	Q03210	505 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	MSS11	Q03825	758 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	DIC1	Q06143	298 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	YDL057W	Q07379	328 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	MED1	Q12321	566 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	RTP1	Q12751	981 aa		2.72	□□□□□ -1.97
RIO2	YNL207W	RPL15A	P05748	204 aa	Known RBP	2.71	□□□□□ -1.98
RIO2	YNL207W	KAR3	P17119	729 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	OLE1	P21147	510 aa	Known RBP	2.71	□□□□□ -1.98
RIO2	YNL207W	SEC62	P21825	274 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	ATS1	P31386	333 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	MUM2	P38236	366 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	SDS24	P38314	527 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	YTA12	P40341	825 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	DOT5	P40553	215 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	ALT2	P52892	507 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	VPS75	P53853	264 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	TOF2	Q02208	771 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	YMR087W	Q04299	284 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	SPE4	Q12455	300 aa		2.71	□□□□□ -1.98
RIO2	YNL207W	CAR1	P00812	333 aa	Known RBP	2.7	□□□□□ -1.98
RIO2	YNL207W	GAL80	P04387	435 aa		2.7	□□□□□ -1.98
RIO2	YNL207W	EXO70	P19658	623 aa		2.7	□□□□□ -1.98
RIO2	YNL207W	KGD1	P20967	1014 aa	Known RBP	2.7	□□□□□ -1.98
RIO2	YNL207W	SYN8	P31377	255 aa		2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms