RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C MUB1Q03162 620 aa0.57□□□□□ -2.32
NIP1YMR309C RLI1Q03195 608 aaKnown RBP0.57□□□□□ -2.32
NIP1YMR309C MRPL51Q06090 140 aaPredicted RBP0.57□□□□□ -2.32
NIP1YMR309C YDL057WQ07379 328 aa0.57□□□□□ -2.32
NIP1YMR309C THI20Q08224 551 aa0.57□□□□□ -2.32
NIP1YMR309C LSP1Q12230 341 aaKnown RBP0.57□□□□□ -2.32
NIP1YMR309C YCL021W-AQ96VH3 125 aa0.57□□□□□ -2.32
NIP1YMR309C FAB1P34756 2278 aa0.57□□□□□ -2.32
NIP1YMR309C PEP5P12868 1029 aa0.57□□□□□ -2.32
NIP1YMR309C ATR1P13090 542 aa0.57□□□□□ -2.32
NIP1YMR309C APA1P16550 321 aaKnown RBP0.57□□□□□ -2.32
NIP1YMR309C SGF29P25554 259 aa0.57□□□□□ -2.32
NIP1YMR309C RER1P25560 188 aa0.57□□□□□ -2.32
NIP1YMR309C IMG1P25626 169 aa0.57□□□□□ -2.32
NIP1YMR309C FUN19P28003 413 aaPredicted RBP0.57□□□□□ -2.32
NIP1YMR309C MRP20P32387 263 aa0.57□□□□□ -2.32
NIP1YMR309C CBF2P32504 956 aa0.57□□□□□ -2.32
NIP1YMR309C SAC6P32599 642 aaKnown RBP0.57□□□□□ -2.32
NIP1YMR309C SPR1P32603 445 aa0.57□□□□□ -2.32
NIP1YMR309C MRS6P32864 603 aaKnown RBP0.57□□□□□ -2.32
NIP1YMR309C MRP4P32902 394 aa0.57□□□□□ -2.32
NIP1YMR309C UBP11P36026 717 aa0.57□□□□□ -2.32
NIP1YMR309C RSM22P36056 628 aa0.57□□□□□ -2.32
NIP1YMR309C MAL33P38157 468 aa0.57□□□□□ -2.32
NIP1YMR309C OSH3P38713 996 aaKnown RBP0.57□□□□□ -2.32
NIP1YMR309C INN1P53901 409 aa0.57□□□□□ -2.32
NIP1YMR309C UBX4P54730 416 aa0.57□□□□□ -2.32
NIP1YMR309C IRC15Q02733 499 aa0.57□□□□□ -2.32
NIP1YMR309C YMR087WQ04299 284 aa0.57□□□□□ -2.32
NIP1YMR309C BUD22Q04347 519 aaKnown RBP0.57□□□□□ -2.32
NIP1YMR309C RCO1Q04779 684 aa0.57□□□□□ -2.32
NIP1YMR309C IVY1Q04934 453 aa0.57□□□□□ -2.32
NIP1YMR309C VPS74Q06385 345 aa0.57□□□□□ -2.32
NIP1YMR309C HNT3Q08702 217 aa0.57□□□□□ -2.32
NIP1YMR309C RPS10AQ08745 105 aaPredicted RBP0.57□□□□□ -2.32
NIP1YMR309C YDL009CQ12210 107 aa0.57□□□□□ -2.32
NIP1YMR309C PWP1P21304 576 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C BUD5P25300 642 aaPredicted RBP0.56□□□□□ -2.32
NIP1YMR309C PUT3P25502 979 aaPredicted RBP0.56□□□□□ -2.32
NIP1YMR309C DBF20P32328 564 aa0.56□□□□□ -2.32
NIP1YMR309C PDB1P32473 366 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C YKL100CP34248 587 aa0.56□□□□□ -2.32
NIP1YMR309C PSY4P38193 441 aa0.56□□□□□ -2.32
NIP1YMR309C YNG2P38806 282 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C KAP123P40069 1113 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C SIM1P40472 476 aa0.56□□□□□ -2.32
NIP1YMR309C WWM1P43582 211 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C SCD6P45978 349 aaKnown RBP RIP-Chip data0.56□□□□□ -2.32not detected
NIP1YMR309C FAR3P46671 204 aa0.56□□□□□ -2.32
NIP1YMR309C PYK2P52489 506 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C SDT1P53078 280 aa0.56□□□□□ -2.32
NIP1YMR309C DSD1P53095 428 aa0.56□□□□□ -2.32
NIP1YMR309C BUD32P53323 261 aa0.56□□□□□ -2.32
NIP1YMR309C RHO4Q00246 291 aa0.56□□□□□ -2.32
NIP1YMR309C GTR1Q00582 310 aa0.56□□□□□ -2.32
NIP1YMR309C RRN11Q04712 507 aa0.56□□□□□ -2.32
NIP1YMR309C VID22Q05934 901 aa0.56□□□□□ -2.32
NIP1YMR309C SYO1Q07395 620 aa0.56□□□□□ -2.32
NIP1YMR309C TMC1Q08422 150 aaPredicted RBP0.56□□□□□ -2.32
NIP1YMR309C YOR387CQ08910 206 aa0.56□□□□□ -2.32
NIP1YMR309C SKM1Q12469 655 aa0.56□□□□□ -2.32
NIP1YMR309C YDL012CQ12489 107 aa0.56□□□□□ -2.32
NIP1YMR309C MF(ALPHA)1P01149 165 aa0.56□□□□□ -2.32
NIP1YMR309C SPT15P13393 240 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C PMR1P13586 950 aa0.56□□□□□ -2.32
NIP1YMR309C NAM9P27929 486 aa0.56□□□□□ -2.32
NIP1YMR309C YME1P32795 747 aa0.56□□□□□ -2.32
NIP1YMR309C YBL055CP34220 418 aaPredicted RBP0.56□□□□□ -2.32
NIP1YMR309C MTR2P34232 184 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C ARP1P38696 384 aa0.56□□□□□ -2.32
NIP1YMR309C FMP10P40098 244 aa0.56□□□□□ -2.32
NIP1YMR309C SAP185P40856 1058 aa0.56□□□□□ -2.32
NIP1YMR309C RPS10BP46784 105 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C RRT6P53117 311 aaPredicted RBP0.56□□□□□ -2.32
NIP1YMR309C BTN2P53286 410 aa0.56□□□□□ -2.32
NIP1YMR309C MSO1P53604 210 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C YNR061CP53747 219 aa0.56□□□□□ -2.32
NIP1YMR309C ARK1P53974 638 aa0.56□□□□□ -2.32
NIP1YMR309C INA17Q02888 182 aa0.56□□□□□ -2.32
NIP1YMR309C PIR3Q03180 325 aa0.56□□□□□ -2.32
NIP1YMR309C SNO4Q04902 237 aa0.56□□□□□ -2.32
NIP1YMR309C PBA1Q05778 276 aa0.56□□□□□ -2.32
NIP1YMR309C MHR1Q06630 226 aa0.56□□□□□ -2.32
NIP1YMR309C RIX7Q07844 837 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C HSP33Q08914 237 aaKnown RBP0.56□□□□□ -2.32
NIP1YMR309C HSP32Q08992 237 aa0.56□□□□□ -2.32
NIP1YMR309C SNF1P06782 633 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C RPB2P08518 1224 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C LPD1P09624 499 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C CDC24P11433 854 aaPredicted RBP0.55□□□□□ -2.32
NIP1YMR309C NAT2P37293 288 aa0.55□□□□□ -2.32
NIP1YMR309C YBL029WP38201 376 aa0.55□□□□□ -2.32
NIP1YMR309C CIN4P39110 191 aa0.55□□□□□ -2.32
NIP1YMR309C YIL067CP40514 678 aa0.55□□□□□ -2.32
NIP1YMR309C YGR210CP42942 411 aa0.55□□□□□ -2.32
NIP1YMR309C PIL1P53252 339 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C GPI1P53306 609 aa0.55□□□□□ -2.32
NIP1YMR309C CAF40P53829 373 aa0.55□□□□□ -2.32
NIP1YMR309C CBK1P53894 756 aa0.55□□□□□ -2.32
NIP1YMR309C YLR152CP54072 576 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms