RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C ATS1P31386 333 aa2.92□□□□□ -1.94
UBX4YMR067C YBL055CP34220 418 aaPredicted RBP2.92□□□□□ -1.94
UBX4YMR067C NUP133P36161 1157 aa2.92□□□□□ -1.94
UBX4YMR067C MTC4P38335 694 aaKnown RBP2.92□□□□□ -1.94
UBX4YMR067C AXL2P38928 823 aa2.92□□□□□ -1.94
UBX4YMR067C PTR3P43606 678 aa2.92□□□□□ -1.94
UBX4YMR067C SIP4P46954 829 aa2.92□□□□□ -1.94
UBX4YMR067C YJR154WP47181 346 aa2.92□□□□□ -1.94
UBX4YMR067C APT1P49435 187 aaKnown RBP2.92□□□□□ -1.94
UBX4YMR067C DUG3P53871 357 aa2.92□□□□□ -1.94
UBX4YMR067C SHR3Q02774 210 aa2.92□□□□□ -1.94
UBX4YMR067C ATG16Q03818 150 aa2.92□□□□□ -1.94
UBX4YMR067C BNA5Q05979 453 aa2.92□□□□□ -1.94
UBX4YMR067C YDL009CQ12210 107 aa2.92□□□□□ -1.94
UBX4YMR067C AYT1Q12226 474 aa2.92□□□□□ -1.94
UBX4YMR067C BOS1P25385 244 aa2.91□□□□□ -1.94
UBX4YMR067C SGF29P25554 259 aa2.91□□□□□ -1.94
UBX4YMR067C PCA1P38360 1216 aa2.91□□□□□ -1.94
UBX4YMR067C OSH3P38713 996 aaKnown RBP2.91□□□□□ -1.94
UBX4YMR067C VPS52P39904 641 aa2.91□□□□□ -1.94
UBX4YMR067C CDC24P11433 854 aaPredicted RBP2.9□□□□□ -1.95
UBX4YMR067C PMR1P13586 950 aa2.9□□□□□ -1.95
UBX4YMR067C SYN8P31377 255 aa2.9□□□□□ -1.95
UBX4YMR067C PMU1P36069 295 aa2.9□□□□□ -1.95
UBX4YMR067C RRN3P36070 627 aa2.9□□□□□ -1.95
UBX4YMR067C TUL1P36096 758 aa2.9□□□□□ -1.95
UBX4YMR067C NPR2P39923 615 aa2.9□□□□□ -1.95
UBX4YMR067C SNG1P46950 547 aa2.9□□□□□ -1.95
UBX4YMR067C BSC5P53755 489 aa2.9□□□□□ -1.95
UBX4YMR067C SYO1Q07395 620 aa2.9□□□□□ -1.95
UBX4YMR067C ENT4Q07872 247 aa2.9□□□□□ -1.95
UBX4YMR067C HEM2P05373 342 aa2.89□□□□□ -1.95
UBX4YMR067C YCR007CP25354 239 aa2.89□□□□□ -1.95
UBX4YMR067C LDB16P25587 256 aa2.89□□□□□ -1.95
UBX4YMR067C IMG1P25626 169 aa2.89□□□□□ -1.95
UBX4YMR067C TIF3P34167 436 aaKnown RBP2.89□□□□□ -1.95
UBX4YMR067C VPS24P36095 224 aaKnown RBP2.89□□□□□ -1.95
UBX4YMR067C ICS2P38284 255 aa2.89□□□□□ -1.95
UBX4YMR067C DED81P38707 554 aaKnown RBP2.89□□□□□ -1.95
UBX4YMR067C YHR210CP38893 341 aa2.89□□□□□ -1.95
UBX4YMR067C CIN4P39110 191 aa2.89□□□□□ -1.95
UBX4YMR067C YGR126WP53274 230 aa2.89□□□□□ -1.95
UBX4YMR067C CBK1P53894 756 aa2.89□□□□□ -1.95
UBX4YMR067C MSC1Q03104 513 aa2.89□□□□□ -1.95
UBX4YMR067C HEL2Q05580 639 aaKnown RBP2.89□□□□□ -1.95
UBX4YMR067C MRPL51Q06090 140 aaPredicted RBP2.89□□□□□ -1.95
UBX4YMR067C YPL272CQ08984 517 aa2.89□□□□□ -1.95
UBX4YMR067C MF(ALPHA)1P01149 165 aa2.88□□□□□ -1.95
UBX4YMR067C FUM1P08417 488 aaKnown RBP2.88□□□□□ -1.95
UBX4YMR067C SGV1P23293 657 aaKnown RBP2.88□□□□□ -1.95
UBX4YMR067C PUT3P25502 979 aaPredicted RBP2.88□□□□□ -1.95
UBX4YMR067C PWP2P25635 923 aaKnown RBP2.88□□□□□ -1.95
UBX4YMR067C MRPL4P36517 319 aa2.88□□□□□ -1.95
UBX4YMR067C RPL32P38061 130 aaKnown RBP2.88□□□□□ -1.95
UBX4YMR067C ALG8P40351 577 aa2.88□□□□□ -1.95
UBX4YMR067C MSO1P53604 210 aaKnown RBP2.88□□□□□ -1.95
UBX4YMR067C VPS74Q06385 345 aa2.88□□□□□ -1.95
UBX4YMR067C YOR365CQ08844 703 aa2.88□□□□□ -1.95
UBX4YMR067C SKM1Q12469 655 aa2.88□□□□□ -1.95
UBX4YMR067C YCL021W-AQ96VH3 125 aa2.88□□□□□ -1.95
UBX4YMR067C ARD1P07347 238 aaPredicted RBP2.87□□□□□ -1.95
UBX4YMR067C LPD1P09624 499 aaKnown RBP2.87□□□□□ -1.95
UBX4YMR067C EXO70P19658 623 aa2.87□□□□□ -1.95
UBX4YMR067C RER1P25560 188 aa2.87□□□□□ -1.95
UBX4YMR067C YIH1P25637 258 aa2.87□□□□□ -1.95
UBX4YMR067C SSE2P32590 693 aaKnown RBP2.87□□□□□ -1.95
UBX4YMR067C AUR1P36107 401 aaPredicted RBP2.87□□□□□ -1.95
UBX4YMR067C MAL33P38157 468 aa2.87□□□□□ -1.95
UBX4YMR067C SHO1P40073 367 aa2.87□□□□□ -1.95
UBX4YMR067C SCD6P45978 349 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
UBX4YMR067C DSD1P53095 428 aa2.87□□□□□ -1.95
UBX4YMR067C RLI1Q03195 608 aaKnown RBP2.87□□□□□ -1.95
UBX4YMR067C RAD30Q04049 632 aa2.87□□□□□ -1.95
UBX4YMR067C BUD22Q04347 519 aaKnown RBP2.87□□□□□ -1.95
UBX4YMR067C HNT3Q08702 217 aa2.87□□□□□ -1.95
UBX4YMR067C LSP1Q12230 341 aaKnown RBP2.87□□□□□ -1.95
UBX4YMR067C KGD1P20967 1014 aaKnown RBP2.86□□□□□ -1.95
UBX4YMR067C YBR144CP34215 104 aa2.86□□□□□ -1.95
UBX4YMR067C FAA2P39518 744 aa2.86□□□□□ -1.95
UBX4YMR067C YEL068CP39977 110 aa2.86□□□□□ -1.95
UBX4YMR067C YJR008WP47085 338 aa2.86□□□□□ -1.95
UBX4YMR067C LYS4P49367 693 aaPredicted RBP2.86□□□□□ -1.95
UBX4YMR067C BUD32P53323 261 aa2.86□□□□□ -1.95
UBX4YMR067C YML131WQ03102 365 aa2.86□□□□□ -1.95
UBX4YMR067C SLD5Q03406 294 aa2.86□□□□□ -1.95
UBX4YMR067C IVY1Q04934 453 aa2.86□□□□□ -1.95
UBX4YMR067C LUC7Q07508 261 aaPredicted RBP2.86□□□□□ -1.95
UBX4YMR067C FMP40Q08968 688 aaPredicted RBP2.86□□□□□ -1.95
UBX4YMR067C NCE102Q12207 173 aaRIP-Chip data2.86□□□□□ -1.95not detected
UBX4YMR067C RPL19AP0CX82 189 aaKnown RBP2.85□□□□□ -1.95
UBX4YMR067C RPL19BP0CX83 189 aaPredicted RBP2.85□□□□□ -1.95
UBX4YMR067C RNA14P25298 677 aaKnown RBP2.85□□□□□ -1.95
UBX4YMR067C UTR4P32626 227 aa2.85□□□□□ -1.95
UBX4YMR067C FRE1P32791 686 aa2.85□□□□□ -1.95
UBX4YMR067C ELP2P42935 788 aa2.85□□□□□ -1.95
UBX4YMR067C ALK1P43633 760 aaKnown RBP2.85□□□□□ -1.95
UBX4YMR067C BTN2P53286 410 aa2.85□□□□□ -1.95
UBX4YMR067C YSA1Q01976 231 aa2.85□□□□□ -1.95
UBX4YMR067C IRC15Q02733 499 aa2.85□□□□□ -1.95
UBX4YMR067C ADD37Q03233 198 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms