RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C TES1P41903 349 aaKnown RBP3.36□□□□□ -1.87
YMR046CYMR046C MAF1P41910 395 aa3.36□□□□□ -1.87
YMR046CYMR046C RMD8P43620 662 aa3.36□□□□□ -1.87
YMR046CYMR046C SOL4P53315 255 aa3.36□□□□□ -1.87
YMR046CYMR046C NUP100Q02629 959 aa3.36□□□□□ -1.87
YMR046CYMR046C SMA1Q02651 245 aa3.36□□□□□ -1.87
YMR046CYMR046C SPC19Q03954 165 aa3.36□□□□□ -1.87
YMR046CYMR046C TAF11Q04226 346 aa3.36□□□□□ -1.87
YMR046CYMR046C YMR254CQ04838 102 aa3.36□□□□□ -1.87
YMR046CYMR046C ETT1Q08421 412 aaKnown RBP3.36□□□□□ -1.87
YMR046CYMR046C SRL1Q08673 210 aa3.36□□□□□ -1.87
YMR046CYMR046C BUD7Q08754 746 aa3.36□□□□□ -1.87
YMR046CYMR046C SCM3Q12334 223 aa3.36□□□□□ -1.87
YMR046CYMR046C STH1P32597 1359 aa3.35□□□□□ -1.87
YMR046CYMR046C TRM732Q03496 1420 aa3.35□□□□□ -1.87
YMR046CYMR046C ARG3P05150 338 aa3.35□□□□□ -1.87
YMR046CYMR046C MRP13P12686 339 aa3.35□□□□□ -1.87
YMR046CYMR046C CBS1P14066 229 aa3.35□□□□□ -1.87
YMR046CYMR046C GID7P25569 745 aa3.35□□□□□ -1.87
YMR046CYMR046C TIF3P34167 436 aaKnown RBP3.35□□□□□ -1.87
YMR046CYMR046C RPL32P38061 130 aaKnown RBP3.35□□□□□ -1.87
YMR046CYMR046C REG2P38232 338 aa3.35□□□□□ -1.87
YMR046CYMR046C YIL169CP40442 995 aa3.35□□□□□ -1.87
YMR046CYMR046C SGN1P40561 250 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
YMR046CYMR046C APT1P49435 187 aaKnown RBP3.35□□□□□ -1.87
YMR046CYMR046C PYK2P52489 506 aaKnown RBP3.35□□□□□ -1.87
YMR046CYMR046C VID30P53076 958 aa3.35□□□□□ -1.87
YMR046CYMR046C HOS2P53096 452 aaPredicted RBP3.35□□□□□ -1.87
YMR046CYMR046C YGR066CP53242 292 aa3.35□□□□□ -1.87
YMR046CYMR046C IPI3P53877 555 aa3.35□□□□□ -1.87
YMR046CYMR046C APL5Q08951 932 aaKnown RBP3.35□□□□□ -1.87
YMR046CYMR046C YJR112W-AQ3E743 109 aa3.35□□□□□ -1.87
YMR046CYMR046C MYO4P32492 1471 aa3.34□□□□□ -1.87
YMR046CYMR046C MMS22Q06164 1454 aa3.34□□□□□ -1.87
YMR046CYMR046C CKA1P15790 372 aa3.34□□□□□ -1.87
YMR046CYMR046C ART10P18634 518 aaKnown RBP3.34□□□□□ -1.87
YMR046CYMR046C MCM4P30665 933 aaKnown RBP3.34□□□□□ -1.87
YMR046CYMR046C NPL6P32832 435 aa3.34□□□□□ -1.87
YMR046CYMR046C SEF1P34228 1148 aa3.34□□□□□ -1.87
YMR046CYMR046C ERG7P38604 731 aa3.34□□□□□ -1.87
YMR046CYMR046C ALG5P40350 334 aa3.34□□□□□ -1.87
YMR046CYMR046C SPO22P40511 975 aa3.34□□□□□ -1.87
YMR046CYMR046C FET5P43561 622 aa3.34□□□□□ -1.87
YMR046CYMR046C LSC1P53598 329 aaKnown RBP3.34□□□□□ -1.87
YMR046CYMR046C DUG3P53871 357 aa3.34□□□□□ -1.87
YMR046CYMR046C RPT6Q01939 405 aaKnown RBP3.34□□□□□ -1.87
YMR046CYMR046C MSC1Q03104 513 aa3.34□□□□□ -1.87
YMR046CYMR046C RSF1Q05043 376 aa3.34□□□□□ -1.87
YMR046CYMR046C YLR287CQ05881 355 aa3.34□□□□□ -1.87
YMR046CYMR046C PAN1P32521 1480 aa3.34□□□□□ -1.88
YMR046CYMR046C FOB1O13329 566 aa3.33□□□□□ -1.88
YMR046CYMR046C DFR1P07807 211 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
YMR046CYMR046C HNM1P19807 563 aa3.33□□□□□ -1.88
YMR046CYMR046C RGT1P32862 1170 aa3.33□□□□□ -1.88
YMR046CYMR046C SRO77P38163 1010 aa3.33□□□□□ -1.88
YMR046CYMR046C EFM2P38347 419 aa3.33□□□□□ -1.88
YMR046CYMR046C LAG1P38703 411 aa3.33□□□□□ -1.88
YMR046CYMR046C MET28P40573 187 aa3.33□□□□□ -1.88
YMR046CYMR046C IMD4P50094 524 aaKnown RBP3.33□□□□□ -1.88
YMR046CYMR046C SMM1P53720 384 aaKnown RBP3.33□□□□□ -1.88
YMR046CYMR046C GIR2Q03768 265 aaPredicted RBP3.33□□□□□ -1.88
YMR046CYMR046C NUP53Q03790 475 aa3.33□□□□□ -1.88
YMR046CYMR046C YMR160WQ03823 816 aa3.33□□□□□ -1.88
YMR046CYMR046C YDR415CQ04033 374 aaPredicted RBP3.33□□□□□ -1.88
YMR046CYMR046C RPC11Q04307 110 aaPredicted RBP3.33□□□□□ -1.88
YMR046CYMR046C FMP42Q04991 504 aa3.33□□□□□ -1.88
YMR046CYMR046C YLR281CQ05863 155 aa3.33□□□□□ -1.88
YMR046CYMR046C VPS38Q05919 439 aa3.33□□□□□ -1.88
YMR046CYMR046C SSK1Q07084 712 aa3.33□□□□□ -1.88
YMR046CYMR046C BSC1Q12140 328 aa3.33□□□□□ -1.88
YMR046CYMR046C HSH49Q99181 213 aaPredicted RBP3.33□□□□□ -1.88
YMR046CYMR046C CDC25P04821 1589 aa3.33□□□□□ -1.88
YMR046CYMR046C SPP41P38904 1435 aa3.32□□□□□ -1.88
YMR046CYMR046C RED1P14291 827 aa3.32□□□□□ -1.88
YMR046CYMR046C PDA1P16387 420 aaKnown RBP3.32□□□□□ -1.88
YMR046CYMR046C SNC1P31109 117 aa3.32□□□□□ -1.88
YMR046CYMR046C RAD24P32641 659 aa3.32□□□□□ -1.88
YMR046CYMR046C PHD1P36093 366 aa3.32□□□□□ -1.88
YMR046CYMR046C TCD2P36101 447 aaKnown RBP3.32□□□□□ -1.88
YMR046CYMR046C CIN4P39110 191 aa3.32□□□□□ -1.88
YMR046CYMR046C ROK1P45818 564 aaPredicted RBP3.32□□□□□ -1.88
YMR046CYMR046C SNG1P46950 547 aa3.32□□□□□ -1.88
YMR046CYMR046C YGR126WP53274 230 aa3.32□□□□□ -1.88
YMR046CYMR046C YVH1Q02256 364 aaKnown RBP3.32□□□□□ -1.88
YMR046CYMR046C YPL014WQ02606 381 aa3.32□□□□□ -1.88
YMR046CYMR046C YLR352WQ06479 807 aa3.32□□□□□ -1.88
YMR046CYMR046C CDC45Q08032 650 aa3.32□□□□□ -1.88
YMR046CYMR046C SFI1Q12369 946 aa3.32□□□□□ -1.88
YMR046CYMR046C AVL9Q12500 764 aa3.32□□□□□ -1.88
YMR046CYMR046C GAL80P04387 435 aa3.31□□□□□ -1.88
YMR046CYMR046C ROX1P25042 368 aa3.31□□□□□ -1.88
YMR046CYMR046C RPS2P25443 254 aaKnown RBP3.31□□□□□ -1.88
YMR046CYMR046C RKM3P38222 552 aa3.31□□□□□ -1.88
YMR046CYMR046C YEL057CP39983 233 aa3.31□□□□□ -1.88
YMR046CYMR046C YND1P40009 630 aa3.31□□□□□ -1.88
YMR046CYMR046C DOT5P40553 215 aa3.31□□□□□ -1.88
YMR046CYMR046C AXL1P40851 1208 aa3.31□□□□□ -1.88
YMR046CYMR046C AZF1P41696 914 aa3.31□□□□□ -1.88
YMR046CYMR046C VTC2P43585 828 aa3.31□□□□□ -1.88
YMR046CYMR046C SAD1P43589 448 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms