RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C SPC110P32380 944 aa3.56□□□□□ -1.84
SUB1YMR039C PTR2P32901 601 aa3.56□□□□□ -1.84
SUB1YMR039C YFR016CP43597 1233 aaKnown RBP3.56□□□□□ -1.84
SUB1YMR039C YGR127WP53275 312 aa3.56□□□□□ -1.84
SUB1YMR039C DPB4Q04603 196 aaKnown RBP3.56□□□□□ -1.84
SUB1YMR039C ENT4Q07872 247 aa3.56□□□□□ -1.84
SUB1YMR039C HSC82P15108 705 aaKnown RBP3.55□□□□□ -1.84
SUB1YMR039C MCK1P21965 375 aaKnown RBP3.55□□□□□ -1.84
SUB1YMR039C BOS1P25385 244 aa3.55□□□□□ -1.84
SUB1YMR039C PUP3P25451 205 aaKnown RBP3.55□□□□□ -1.84
SUB1YMR039C ATS1P31386 333 aa3.55□□□□□ -1.84
SUB1YMR039C AGA1P32323 725 aa3.55□□□□□ -1.84
SUB1YMR039C YBL055CP34220 418 aaPredicted RBP3.55□□□□□ -1.84
SUB1YMR039C VID27P40157 782 aa3.55□□□□□ -1.84
SUB1YMR039C PTR3P43606 678 aa3.55□□□□□ -1.84
SUB1YMR039C FAR3P46671 204 aa3.55□□□□□ -1.84
SUB1YMR039C BSC5P53755 489 aa3.55□□□□□ -1.84
SUB1YMR039C SMA2Q04658 369 aa3.55□□□□□ -1.84
SUB1YMR039C GLO2Q05584 274 aa3.55□□□□□ -1.84
SUB1YMR039C OPY2Q06810 360 aa3.55□□□□□ -1.84
SUB1YMR039C YLL056CQ12177 298 aa3.55□□□□□ -1.84
SUB1YMR039C RRI2Q12348 645 aa3.55□□□□□ -1.84
SUB1YMR039C CDC24P11433 854 aaPredicted RBP3.54□□□□□ -1.84
SUB1YMR039C AMD1P15274 810 aaKnown RBP3.54□□□□□ -1.84
SUB1YMR039C SGV1P23293 657 aaKnown RBP3.54□□□□□ -1.84
SUB1YMR039C YKL023WP36103 277 aaKnown RBP3.54□□□□□ -1.84
SUB1YMR039C NUP133P36161 1157 aa3.54□□□□□ -1.84
SUB1YMR039C YBP1P38315 674 aa3.54□□□□□ -1.84
SUB1YMR039C LYS4P49367 693 aaPredicted RBP3.54□□□□□ -1.84
SUB1YMR039C APT1P49435 187 aaKnown RBP3.54□□□□□ -1.84
SUB1YMR039C ALT2P52892 507 aa3.54□□□□□ -1.84
SUB1YMR039C RAD30Q04049 632 aa3.54□□□□□ -1.84
SUB1YMR039C YPL272CQ08984 517 aa3.54□□□□□ -1.84
SUB1YMR039C AYT1Q12226 474 aa3.54□□□□□ -1.84
SUB1YMR039C PEP5P12868 1029 aa3.53□□□□□ -1.84
SUB1YMR039C APE1P14904 514 aa3.53□□□□□ -1.84
SUB1YMR039C MAL33P38157 468 aa3.53□□□□□ -1.84
SUB1YMR039C MTC4P38335 694 aaKnown RBP3.53□□□□□ -1.84
SUB1YMR039C OSH3P38713 996 aaKnown RBP3.53□□□□□ -1.84
SUB1YMR039C YPI1P43587 155 aa3.53□□□□□ -1.84
SUB1YMR039C SNG1P46950 547 aa3.53□□□□□ -1.84
SUB1YMR039C DUG3P53871 357 aa3.53□□□□□ -1.84
SUB1YMR039C MSC1Q03104 513 aa3.53□□□□□ -1.84
SUB1YMR039C BNA5Q05979 453 aa3.53□□□□□ -1.84
SUB1YMR039C RPL20AP0CX23 172 aaKnown RBP3.52□□□□□ -1.85
SUB1YMR039C RPL20BP0CX24 172 aaPredicted RBP3.52□□□□□ -1.85
SUB1YMR039C KGD1P20967 1014 aaKnown RBP3.52□□□□□ -1.85
SUB1YMR039C IMG1P25626 169 aa3.52□□□□□ -1.85
SUB1YMR039C AUR1P36107 401 aaPredicted RBP3.52□□□□□ -1.85
SUB1YMR039C TIF5P38431 405 aaKnown RBP3.52□□□□□ -1.85
SUB1YMR039C VPS52P39904 641 aa3.52□□□□□ -1.85
SUB1YMR039C IDP2P41939 412 aa3.52□□□□□ -1.85
SUB1YMR039C SHR3Q02774 210 aa3.52□□□□□ -1.85
SUB1YMR039C VIP1Q06685 1146 aaKnown RBP3.52□□□□□ -1.85
SUB1YMR039C SYO1Q07395 620 aa3.52□□□□□ -1.85
SUB1YMR039C YDL009CQ12210 107 aa3.52□□□□□ -1.85
SUB1YMR039C RTP1Q12751 981 aa3.52□□□□□ -1.85
SUB1YMR039C CAR1P00812 333 aaKnown RBP3.51□□□□□ -1.85
SUB1YMR039C MF(ALPHA)1P01149 165 aa3.51□□□□□ -1.85
SUB1YMR039C ARD1P07347 238 aaPredicted RBP3.51□□□□□ -1.85
SUB1YMR039C GFD2P25370 566 aaKnown RBP3.51□□□□□ -1.85
SUB1YMR039C SGF29P25554 259 aa3.51□□□□□ -1.85
SUB1YMR039C SSE2P32590 693 aaKnown RBP3.51□□□□□ -1.85
SUB1YMR039C SAC6P32599 642 aaKnown RBP3.51□□□□□ -1.85
SUB1YMR039C YBL029WP38201 376 aa3.51□□□□□ -1.85
SUB1YMR039C ICS2P38284 255 aa3.51□□□□□ -1.85
SUB1YMR039C AFG3P39925 761 aa3.51□□□□□ -1.85
SUB1YMR039C DPH1P40487 425 aaKnown RBP3.51□□□□□ -1.85
SUB1YMR039C SPG5P42933 373 aa3.51□□□□□ -1.85
SUB1YMR039C YJR154WP47181 346 aa3.51□□□□□ -1.85
SUB1YMR039C BUD32P53323 261 aa3.51□□□□□ -1.85
SUB1YMR039C YSA1Q01976 231 aa3.51□□□□□ -1.85
SUB1YMR039C GIR2Q03768 265 aaPredicted RBP3.51□□□□□ -1.85
SUB1YMR039C NCE102Q12207 173 aaRIP-Chip data3.51□□□□□ -1.85not detected
SUB1YMR039C HEM2P05373 342 aa3.5□□□□□ -1.85
SUB1YMR039C RPL19AP0CX82 189 aaKnown RBP3.5□□□□□ -1.85
SUB1YMR039C RPL19BP0CX83 189 aaPredicted RBP3.5□□□□□ -1.85
SUB1YMR039C REV1P12689 985 aa3.5□□□□□ -1.85
SUB1YMR039C ATR1P13090 542 aa3.5□□□□□ -1.85
SUB1YMR039C SUI2P20459 304 aaKnown RBP3.5□□□□□ -1.85
SUB1YMR039C YBR144CP34215 104 aa3.5□□□□□ -1.85
SUB1YMR039C MPE1P35728 441 aaKnown RBP3.5□□□□□ -1.85
SUB1YMR039C JNM1P36224 373 aa3.5□□□□□ -1.85
SUB1YMR039C RPL32P38061 130 aaKnown RBP3.5□□□□□ -1.85
SUB1YMR039C PCA1P38360 1216 aa3.5□□□□□ -1.85
SUB1YMR039C YHR210CP38893 341 aa3.5□□□□□ -1.85
SUB1YMR039C LYS14P40971 790 aa3.5□□□□□ -1.85
SUB1YMR039C DSD1P53095 428 aa3.5□□□□□ -1.85
SUB1YMR039C YGR126WP53274 230 aa3.5□□□□□ -1.85
SUB1YMR039C LUC7Q07508 261 aaPredicted RBP3.5□□□□□ -1.85
SUB1YMR039C YOR365CQ08844 703 aa3.5□□□□□ -1.85
SUB1YMR039C KAR3P17119 729 aa3.49□□□□□ -1.85
SUB1YMR039C SAN1P22470 610 aa3.49□□□□□ -1.85
SUB1YMR039C YIH1P25637 258 aa3.49□□□□□ -1.85
SUB1YMR039C CHS3P29465 1165 aa3.49□□□□□ -1.85
SUB1YMR039C IMP2'P32351 346 aa3.49□□□□□ -1.85
SUB1YMR039C MCM10P32354 571 aa3.49□□□□□ -1.85
SUB1YMR039C CIN4P39110 191 aa3.49□□□□□ -1.85
SUB1YMR039C NPR2P39923 615 aa3.49□□□□□ -1.85
SUB1YMR039C YEL068CP39977 110 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms