RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C SCS2P40075 244 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C CAB2P40506 365 aa1.81□□□□□ -2.12
IRC20YLR247C COS5P47187 383 aa1.81□□□□□ -2.12
IRC20YLR247C MPS2P53159 387 aa1.81□□□□□ -2.12
IRC20YLR247C RRN5Q02983 363 aa1.81□□□□□ -2.12
IRC20YLR247C YLR173WQ06247 608 aa1.81□□□□□ -2.12
IRC20YLR247C VAM6Q07468 1049 aa1.81□□□□□ -2.12
IRC20YLR247C YIG1Q08956 461 aa1.81□□□□□ -2.12
IRC20YLR247C YPL257WQ08974 193 aa1.81□□□□□ -2.12
IRC20YLR247C YPL277CQ08989 487 aa1.81□□□□□ -2.12
IRC20YLR247C RIM20Q12033 661 aa1.81□□□□□ -2.12
IRC20YLR247C MDY2Q12285 212 aa1.81□□□□□ -2.12
IRC20YLR247C DCN1Q12395 269 aa1.81□□□□□ -2.12
IRC20YLR247C MTR10Q99189 972 aa1.81□□□□□ -2.12
IRC20YLR247C FLP1P03870 423 aa1.8□□□□□ -2.12
IRC20YLR247C RPC40P07703 335 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C YGL041W-AP0C5N3 154 aa1.8□□□□□ -2.12
IRC20YLR247C PYC1P11154 1178 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C THR4P16120 514 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C CKA2P19454 339 aa1.8□□□□□ -2.12
IRC20YLR247C CKI1P20485 582 aa1.8□□□□□ -2.12
IRC20YLR247C HEM3P28789 327 aa1.8□□□□□ -2.12
IRC20YLR247C TPS2P31688 896 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C SHM2P37291 469 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C EXO5P38289 585 aa1.8□□□□□ -2.12
IRC20YLR247C MLH1P38920 769 aa1.8□□□□□ -2.12
IRC20YLR247C DHH1P39517 506 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C FLC2P39719 783 aa1.8□□□□□ -2.12
IRC20YLR247C RSP5P39940 809 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C ALG5P40350 334 aa1.8□□□□□ -2.12
IRC20YLR247C SDS3P40505 327 aa1.8□□□□□ -2.12
IRC20YLR247C SPO22P40511 975 aa1.8□□□□□ -2.12
IRC20YLR247C SEC26P41810 973 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C RTT102P53330 157 aa1.8□□□□□ -2.12
IRC20YLR247C IMP4P53941 290 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C TMA20P89886 181 aaPredicted RBP1.8□□□□□ -2.12
IRC20YLR247C HER2Q03557 464 aa1.8□□□□□ -2.12
IRC20YLR247C YMR209CQ03648 457 aa1.8□□□□□ -2.12
IRC20YLR247C ECM18Q04623 453 aa1.8□□□□□ -2.12
IRC20YLR247C HRQ1Q05549 1077 aa1.8□□□□□ -2.12
IRC20YLR247C CDC123Q05791 360 aa1.8□□□□□ -2.12
IRC20YLR247C SPO77Q06134 477 aa1.8□□□□□ -2.12
IRC20YLR247C YPR091CQ06833 770 aa1.8□□□□□ -2.12
IRC20YLR247C CRD1Q07560 283 aa1.8□□□□□ -2.12
IRC20YLR247C REX4Q08237 289 aa1.8□□□□□ -2.12
IRC20YLR247C PUS9Q12069 462 aa1.8□□□□□ -2.12
IRC20YLR247C MCD1Q12158 566 aa1.8□□□□□ -2.12
IRC20YLR247C YDL085C-AQ3E7B7 68 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C YKL033W-AQ86ZR7 236 aa1.8□□□□□ -2.12
IRC20YLR247C TRP3P00937 484 aa1.8□□□□□ -2.12
IRC20YLR247C RPL7AP05737 244 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C NFT1P0CE68 1218 aa1.8□□□□□ -2.12
IRC20YLR247C HSP60P19882 572 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C OLE1P21147 510 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C RPA135P22138 1203 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C NAR1P23503 491 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C CLB2P24869 491 aa1.8□□□□□ -2.12
IRC20YLR247C SWI4P25302 1093 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C NPP1P25353 742 aa1.8□□□□□ -2.12
IRC20YLR247C GSY2P27472 705 aa1.8□□□□□ -2.12
IRC20YLR247C VMA6P32366 345 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C SIP1P32578 815 aa1.8□□□□□ -2.12
IRC20YLR247C YSC83P32792 385 aa1.8□□□□□ -2.12
IRC20YLR247C CYM1P32898 989 aa1.8□□□□□ -2.12
IRC20YLR247C SHE2P36068 246 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
IRC20YLR247C PPE1P38796 400 aa1.8□□□□□ -2.12
IRC20YLR247C ATG7P38862 630 aa1.8□□□□□ -2.12
IRC20YLR247C PCL6P40038 420 aa1.8□□□□□ -2.12
IRC20YLR247C YER137CP40083 148 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C JEM1P40358 645 aa1.8□□□□□ -2.12
IRC20YLR247C YJL070CP40361 888 aa1.8□□□□□ -2.12
IRC20YLR247C TOS3P43637 560 aa1.8□□□□□ -2.12
IRC20YLR247C MOG1P47123 218 aa1.8□□□□□ -2.12
IRC20YLR247C YGR153WP48238 217 aa1.8□□□□□ -2.12
IRC20YLR247C YGR237CP50089 785 aa1.8□□□□□ -2.12
IRC20YLR247C YAP1802P53309 568 aa1.8□□□□□ -2.12
IRC20YLR247C YNL010WP53981 241 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C REX2P54964 269 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C NHP10Q03435 203 aa1.8□□□□□ -2.12
IRC20YLR247C YMR087WQ04299 284 aa1.8□□□□□ -2.12
IRC20YLR247C SEC13Q04491 297 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C AIM32Q04689 311 aa1.8□□□□□ -2.12
IRC20YLR247C ESC8Q08119 714 aa1.8□□□□□ -2.12
IRC20YLR247C APC11Q12157 165 aa1.8□□□□□ -2.12
IRC20YLR247C SNF5P18480 905 aa1.8□□□□□ -2.12
IRC20YLR247C MAG1P22134 296 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C MRS4P23500 304 aa1.8□□□□□ -2.12
IRC20YLR247C NHP2P32495 156 aaPredicted RBP1.8□□□□□ -2.12
IRC20YLR247C MUD1P32605 298 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C REC114P32841 428 aa1.8□□□□□ -2.12
IRC20YLR247C TCD2P36101 447 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C ADE17P38009 592 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C HSL7P38274 827 aa1.8□□□□□ -2.12
IRC20YLR247C SRP68P38687 599 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C SBE22P38814 852 aa1.8□□□□□ -2.12
IRC20YLR247C RPN10P38886 268 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C SIP5P40210 489 aaKnown RBP1.8□□□□□ -2.12
IRC20YLR247C MET28P40573 187 aa1.8□□□□□ -2.12
IRC20YLR247C IME4P41833 600 aa1.8□□□□□ -2.12
IRC20YLR247C MIC19P43594 170 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms