RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C VMA22P38784 181 aa10.9□□□□□ -0.66
SPT8YLR055C YHR218WP38899 603 aa10.9□□□□□ -0.66
SPT8YLR055C TRM12Q04235 462 aa10.9□□□□□ -0.66
SPT8YLR055C YPL191CQ08930 360 aa10.9□□□□□ -0.66
SPT8YLR055C MRP21P38175 177 aa10.89□□□□□ -0.67
SPT8YLR055C YHR112CP38716 378 aa10.89□□□□□ -0.67
SPT8YLR055C GND2P53319 492 aa10.89□□□□□ -0.67
SPT8YLR055C SVL3Q03088 825 aaKnown RBP10.89□□□□□ -0.67
SPT8YLR055C TLG1Q03322 224 aa10.89□□□□□ -0.67
SPT8YLR055C YDR344CQ05510 147 aa10.89□□□□□ -0.67
SPT8YLR055C YLR413WQ06689 675 aa10.89□□□□□ -0.67
SPT8YLR055C YOR387CQ08910 206 aa10.89□□□□□ -0.67
SPT8YLR055C MED11Q99278 115 aa10.89□□□□□ -0.67
SPT8YLR055C ARG3P05150 338 aa10.88□□□□□ -0.67
SPT8YLR055C CMK2P22517 447 aa10.88□□□□□ -0.67
SPT8YLR055C MRS6P32864 603 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C TFA2P36145 328 aa10.88□□□□□ -0.67
SPT8YLR055C KTR4P38131 464 aa10.88□□□□□ -0.67
SPT8YLR055C AST2P39945 430 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C EDC3P39998 551 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C ROK1P45818 564 aaPredicted RBP10.88□□□□□ -0.67
SPT8YLR055C SIW14P53965 281 aa10.88□□□□□ -0.67
SPT8YLR055C MET14Q02196 202 aa10.88□□□□□ -0.67
SPT8YLR055C ENT5Q03769 411 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C URC2Q04411 772 aa10.88□□□□□ -0.67
SPT8YLR055C YLL032CQ07834 825 aaKnown RBP RIP-Chip data10.88□□□□□ -0.67not detected
SPT8YLR055C HIS1P00498 297 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C NSP1P14907 823 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C BET2P20133 325 aa10.88□□□□□ -0.67
SPT8YLR055C YCK2P23292 546 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C PPZ1P26570 692 aa10.88□□□□□ -0.67
SPT8YLR055C FUN30P31380 1131 aa10.88□□□□□ -0.67
SPT8YLR055C APE2P32454 952 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C RBG1P39729 369 aa10.88□□□□□ -0.67
SPT8YLR055C TRM112P53738 135 aaPredicted RBP10.88□□□□□ -0.67
SPT8YLR055C TIM11P81449 96 aaPredicted RBP10.88□□□□□ -0.67
SPT8YLR055C PRP38Q00723 242 aaPredicted RBP10.88□□□□□ -0.67
SPT8YLR055C NOP12Q08208 459 aaKnown RBP10.88□□□□□ -0.67
SPT8YLR055C RKM1Q08961 583 aaPredicted RBP10.88□□□□□ -0.67
SPT8YLR055C PFK27Q12471 397 aaPredicted RBP10.88□□□□□ -0.67
SPT8YLR055C HEM2P05373 342 aa10.87□□□□□ -0.67
SPT8YLR055C RPB4P20433 221 aaPredicted RBP10.87□□□□□ -0.67
SPT8YLR055C SIR1P21691 654 aa10.87□□□□□ -0.67
SPT8YLR055C IMG2P25642 146 aaPredicted RBP10.87□□□□□ -0.67
SPT8YLR055C CIN8P27895 1000 aa10.87□□□□□ -0.67
SPT8YLR055C SGE1P33335 543 aa10.87□□□□□ -0.67
SPT8YLR055C TOM20P35180 183 aa10.87□□□□□ -0.67
SPT8YLR055C KEL2P50090 882 aa10.87□□□□□ -0.67
SPT8YLR055C RSC9Q03124 581 aa10.87□□□□□ -0.67
SPT8YLR055C UGO1Q03327 502 aa10.87□□□□□ -0.67
SPT8YLR055C YDR131CQ03899 556 aa10.87□□□□□ -0.67
SPT8YLR055C RAD33Q04231 177 aa10.87□□□□□ -0.67
SPT8YLR055C ENT2Q05785 613 aa10.87□□□□□ -0.67
SPT8YLR055C GPI11Q06636 219 aa10.87□□□□□ -0.67
SPT8YLR055C RCN2Q12044 265 aa10.87□□□□□ -0.67
SPT8YLR055C SCM3Q12334 223 aa10.87□□□□□ -0.67
SPT8YLR055C COX5AP00424 153 aa10.86□□□□□ -0.67
SPT8YLR055C ACO1P19414 778 aaKnown RBP RIP-Chip data10.86□□□□□ -0.67not detected
SPT8YLR055C PUP3P25451 205 aaKnown RBP10.86□□□□□ -0.67
SPT8YLR055C SBA1P28707 216 aaKnown RBP10.86□□□□□ -0.67
SPT8YLR055C PTM1P32857 523 aa10.86□□□□□ -0.67
SPT8YLR055C FRE2P36033 711 aa10.86□□□□□ -0.67
SPT8YLR055C HAT2P39984 401 aa10.86□□□□□ -0.67
SPT8YLR055C BST1P43571 1029 aa10.86□□□□□ -0.67
SPT8YLR055C BNI4P53858 892 aa10.86□□□□□ -0.67
SPT8YLR055C SPR6Q01684 191 aa10.86□□□□□ -0.67
SPT8YLR055C TOF2Q02208 771 aa10.86□□□□□ -0.67
SPT8YLR055C SWP1Q02795 286 aa10.86□□□□□ -0.67
SPT8YLR055C TAF12Q03761 539 aa10.86□□□□□ -0.67
SPT8YLR055C SWC7Q06707 132 aa10.86□□□□□ -0.67
SPT8YLR055C YDL121CQ07541 149 aa10.86□□□□□ -0.67
SPT8YLR055C FLC1Q08967 793 aa10.86□□□□□ -0.67
SPT8YLR055C YLR049CQ12110 428 aa10.86□□□□□ -0.67
SPT8YLR055C RAD59Q12223 238 aa10.86□□□□□ -0.67
SPT8YLR055C YOL159C-AQ3E769 90 aa10.86□□□□□ -0.67
SPT8YLR055C TOP3P13099 656 aa10.86□□□□□ -0.67
SPT8YLR055C PEX3P28795 441 aa10.86□□□□□ -0.67
SPT8YLR055C YKL097CP34245 136 aa10.86□□□□□ -0.67
SPT8YLR055C MUP3P38734 546 aa10.86□□□□□ -0.67
SPT8YLR055C IRC6P43615 237 aa10.86□□□□□ -0.67
SPT8YLR055C EFM3P47163 339 aa10.86□□□□□ -0.67
SPT8YLR055C PRP24P49960 444 aaKnown RBP10.86□□□□□ -0.67
SPT8YLR055C SLD3P53135 668 aa10.86□□□□□ -0.67
SPT8YLR055C EFM5P53200 248 aaKnown RBP10.86□□□□□ -0.67
SPT8YLR055C IBD2P53892 351 aa10.86□□□□□ -0.67
SPT8YLR055C RCF1Q03713 159 aa10.86□□□□□ -0.67
SPT8YLR055C GAL83Q04739 417 aa10.86□□□□□ -0.67
SPT8YLR055C HEL2Q05580 639 aaKnown RBP10.86□□□□□ -0.67
SPT8YLR055C MRP13P12686 339 aa10.85□□□□□ -0.67
SPT8YLR055C CMK1P27466 446 aaKnown RBP10.85□□□□□ -0.67
SPT8YLR055C MET22P32179 357 aa10.85□□□□□ -0.67
SPT8YLR055C MRPL17P36528 281 aa10.85□□□□□ -0.67
SPT8YLR055C ECM8P38246 354 aa10.85□□□□□ -0.67
SPT8YLR055C BOL2P53082 120 aa10.85□□□□□ -0.67
SPT8YLR055C TUB4P53378 473 aa10.85□□□□□ -0.67
SPT8YLR055C YNR063WP53749 607 aa10.85□□□□□ -0.67
SPT8YLR055C MAP1Q01662 387 aaKnown RBP RIP-Chip data10.85□□□□□ -0.67not detected
SPT8YLR055C YML131WQ03102 365 aa10.85□□□□□ -0.67
SPT8YLR055C SEG1Q04279 960 aa10.85□□□□□ -0.67
SPT8YLR055C TMN2Q04562 672 aa10.85□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 95.9 ms