RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YPL034WQ03083 165 aa2.51□□□□□ -2.01
SDC25YLL016W ABZ2Q03266 374 aa2.51□□□□□ -2.01
SDC25YLL016W PDS5Q04264 1277 aa2.51□□□□□ -2.01
SDC25YLL016W MGR3Q04472 501 aa2.51□□□□□ -2.01
SDC25YLL016W FRE5Q08908 694 aa2.51□□□□□ -2.01
SDC25YLL016W TRM11Q12463 433 aa2.51□□□□□ -2.01
SDC25YLL016W HIP1P06775 603 aa2.51□□□□□ -2.01
SDC25YLL016W CAF20P12962 161 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W HXT3P32466 567 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W TUL1P36096 758 aa2.51□□□□□ -2.01
SDC25YLL016W MNN2P38069 597 aa2.51□□□□□ -2.01
SDC25YLL016W YHL017WP38745 532 aa2.51□□□□□ -2.01
SDC25YLL016W ALK1P43633 760 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W MET12P46151 657 aa2.51□□□□□ -2.01
SDC25YLL016W MSE1P48525 536 aa2.51□□□□□ -2.01
SDC25YLL016W DCP2P53550 970 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W BOP3P53958 396 aa2.51□□□□□ -2.01
SDC25YLL016W TOF2Q02208 771 aa2.51□□□□□ -2.01
SDC25YLL016W MFM1Q02783 413 aa2.51□□□□□ -2.01
SDC25YLL016W USA1Q03714 838 aa2.51□□□□□ -2.01
SDC25YLL016W ARR3Q06598 404 aa2.51□□□□□ -2.01
SDC25YLL016W SIL1Q08199 421 aa2.51□□□□□ -2.01
SDC25YLL016W GPN2Q08726 347 aaPredicted RBP2.51□□□□□ -2.01
SDC25YLL016W AHC1Q12433 566 aa2.51□□□□□ -2.01
SDC25YLL016W YIL002W-AQ3E7Z5 69 aa2.51□□□□□ -2.01
SDC25YLL016W HXK2P04807 486 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W HIS5P07172 385 aa2.51□□□□□ -2.01
SDC25YLL016W YML003WP0CF16 290 aa2.51□□□□□ -2.01
SDC25YLL016W URA4P20051 364 aa2.51□□□□□ -2.01
SDC25YLL016W WBP1P33767 430 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W FAD1P38913 306 aa2.51□□□□□ -2.01
SDC25YLL016W SMC2P38989 1170 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W CHS6P40955 746 aa2.51□□□□□ -2.01
SDC25YLL016W LSB3P43603 459 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W PRY1P47032 299 aa2.51□□□□□ -2.01
SDC25YLL016W KEL2P50090 882 aa2.51□□□□□ -2.01
SDC25YLL016W YGL082WP53155 381 aa2.51□□□□□ -2.01
SDC25YLL016W CAF130P53280 1122 aaPredicted RBP2.51□□□□□ -2.01
SDC25YLL016W MRPS35P53292 345 aa2.51□□□□□ -2.01
SDC25YLL016W RRP45Q05636 305 aaKnown RBP2.51□□□□□ -2.01
SDC25YLL016W UBX3Q12229 455 aa2.51□□□□□ -2.01
SDC25YLL016W TAL1P15019 335 aaKnown RBP2.5□□□□□ -2.01
SDC25YLL016W DAP2P18962 818 aa2.5□□□□□ -2.01
SDC25YLL016W MSB1P21339 1137 aaKnown RBP2.5□□□□□ -2.01
SDC25YLL016W PDB1P32473 366 aaKnown RBP2.5□□□□□ -2.01
SDC25YLL016W GSH1P32477 678 aa2.5□□□□□ -2.01
SDC25YLL016W MRE11P32829 692 aa2.5□□□□□ -2.01
SDC25YLL016W ELF1P36053 145 aa2.5□□□□□ -2.01
SDC25YLL016W ARO9P38840 513 aaPredicted RBP2.5□□□□□ -2.01
SDC25YLL016W FMO1P38866 432 aa2.5□□□□□ -2.01
SDC25YLL016W IMO32P53219 342 aa2.5□□□□□ -2.01
SDC25YLL016W RBS1Q05672 457 aaKnown RBP2.5□□□□□ -2.01
SDC25YLL016W YPR172WQ06608 200 aa2.5□□□□□ -2.01
SDC25YLL016W AEP3Q12089 606 aa2.5□□□□□ -2.01
SDC25YLL016W COX1P00401 534 aa2.5□□□□□ -2.01
SDC25YLL016W ADH7P25377 361 aa2.5□□□□□ -2.01
SDC25YLL016W BUD14P27637 709 aa2.5□□□□□ -2.01
SDC25YLL016W UGP1P32861 499 aaKnown RBP2.5□□□□□ -2.01
SDC25YLL016W YBL055CP34220 418 aaPredicted RBP2.5□□□□□ -2.01
SDC25YLL016W SAF1P38352 637 aa2.5□□□□□ -2.01
SDC25YLL016W ELO3P40319 345 aa2.5□□□□□ -2.01
SDC25YLL016W PTR3P43606 678 aa2.5□□□□□ -2.01
SDC25YLL016W NET1P47035 1189 aa2.5□□□□□ -2.01
SDC25YLL016W MPS3P47069 682 aa2.5□□□□□ -2.01
SDC25YLL016W NUP84P52891 726 aa2.5□□□□□ -2.01
SDC25YLL016W YDR109CQ04585 715 aa2.5□□□□□ -2.01
SDC25YLL016W TUS1Q06412 1307 aa2.5□□□□□ -2.01
SDC25YLL016W ARV1Q06541 321 aa2.5□□□□□ -2.01
SDC25YLL016W FRE3Q08905 711 aa2.5□□□□□ -2.01
SDC25YLL016W YPL216WQ08964 1102 aa2.5□□□□□ -2.01
SDC25YLL016W PRS5Q12265 496 aaKnown RBP2.5□□□□□ -2.01
SDC25YLL016W AI5_ALPHAQ9ZZX1 630 aa2.5□□□□□ -2.01
SDC25YLL016W HNM1P19807 563 aa2.49□□□□□ -2.01
SDC25YLL016W BUD5P25300 642 aaPredicted RBP2.49□□□□□ -2.01
SDC25YLL016W RML2P32611 393 aa2.49□□□□□ -2.01
SDC25YLL016W EBP2P36049 427 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W MRPL7P36519 292 aa2.49□□□□□ -2.01
SDC25YLL016W SDH8P38345 138 aa2.49□□□□□ -2.01
SDC25YLL016W HSM3P38348 480 aa2.49□□□□□ -2.01
SDC25YLL016W YFR018CP43599 363 aa2.49□□□□□ -2.01
SDC25YLL016W RMD9P53140 646 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W LSC1P53598 329 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W PRM1P53835 661 aa2.49□□□□□ -2.01
SDC25YLL016W PRO2P54885 456 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W EGD1Q02642 157 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W VTC3Q02725 835 aa2.49□□□□□ -2.01
SDC25YLL016W YMR187CQ03236 431 aa2.49□□□□□ -2.01
SDC25YLL016W YMR130WQ04223 302 aa2.49□□□□□ -2.01
SDC25YLL016W ACK1Q07622 623 aaPredicted RBP2.49□□□□□ -2.01
SDC25YLL016W LEU9Q12166 604 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W YRM1Q12340 786 aa2.49□□□□□ -2.01
SDC25YLL016W MRPL23Q12487 163 aaPredicted RBP2.49□□□□□ -2.01
SDC25YLL016W YBR255C-AQ3E776 120 aa2.49□□□□□ -2.01
SDC25YLL016W STE2D6VTK4 431 aa2.49□□□□□ -2.01
SDC25YLL016W ILV2P07342 687 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W MRP13P12686 339 aa2.49□□□□□ -2.01
SDC25YLL016W SPO7P18410 259 aa2.49□□□□□ -2.01
SDC25YLL016W SSE2P32590 693 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W HIS7P33734 552 aaKnown RBP2.49□□□□□ -2.01
SDC25YLL016W SOF1P33750 489 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms