RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C RPE1P46969 238 aa3.9□□□□□ -1.79
SPT23YKL020C MPS3P47069 682 aa3.9□□□□□ -1.79
SPT23YKL020C YPT32P51996 222 aaKnown RBP3.9□□□□□ -1.79
SPT23YKL020C COG1P53079 417 aa3.9□□□□□ -1.79
SPT23YKL020C RIM8P53179 542 aa3.9□□□□□ -1.79
SPT23YKL020C DBP6P53734 629 aaKnown RBP3.9□□□□□ -1.79
SPT23YKL020C RUB1Q03919 77 aa3.9□□□□□ -1.79
SPT23YKL020C HRK1Q08732 759 aaKnown RBP3.9□□□□□ -1.79
SPT23YKL020C FAL1Q12099 399 aaKnown RBP3.9□□□□□ -1.79
SPT23YKL020C LDB17Q12342 491 aa3.9□□□□□ -1.79
SPT23YKL020C ATG31Q12421 196 aa3.9□□□□□ -1.79
SPT23YKL020C YDL206WQ12424 762 aa3.9□□□□□ -1.79
SPT23YKL020C MTR10Q99189 972 aa3.9□□□□□ -1.79
SPT23YKL020C TRM2P33753 639 aa3.89□□□□□ -1.79
SPT23YKL020C RPC25P35718 212 aa3.89□□□□□ -1.79
SPT23YKL020C UBS1P38290 277 aa3.89□□□□□ -1.79
SPT23YKL020C MMS21P38632 267 aa3.89□□□□□ -1.79
SPT23YKL020C ATM1P40416 690 aa3.89□□□□□ -1.79
SPT23YKL020C YFR018CP43599 363 aa3.89□□□□□ -1.79
SPT23YKL020C YGL036WP53185 909 aaPredicted RBP3.89□□□□□ -1.79
SPT23YKL020C YGR127WP53275 312 aa3.89□□□□□ -1.79
SPT23YKL020C SSU72P53538 206 aaPredicted RBP3.89□□□□□ -1.79
SPT23YKL020C CAF40P53829 373 aa3.89□□□□□ -1.79
SPT23YKL020C NGL2Q03264 515 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C TDA9Q04545 1251 aa3.89□□□□□ -1.79
SPT23YKL020C GPN3Q06543 272 aa3.89□□□□□ -1.79
SPT23YKL020C KEL3Q08979 651 aaPredicted RBP3.89□□□□□ -1.79
SPT23YKL020C LEU9Q12166 604 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C YEL077CQ3E7X8 1277 aa3.89□□□□□ -1.79
SPT23YKL020C FKS3Q04952 1785 aa3.89□□□□□ -1.79
SPT23YKL020C NFT1P0CE68 1218 aa3.89□□□□□ -1.79
SPT23YKL020C SST2P11972 698 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C CBF1P17106 351 aa3.89□□□□□ -1.79
SPT23YKL020C RNR3P21672 869 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C MNE1P24720 663 aa3.89□□□□□ -1.79
SPT23YKL020C RNA15P25299 296 aaPredicted RBP3.89□□□□□ -1.79
SPT23YKL020C RRT12P25381 491 aa3.89□□□□□ -1.79
SPT23YKL020C GID7P25569 745 aa3.89□□□□□ -1.79
SPT23YKL020C PDX3P38075 228 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C CDS1P38221 457 aa3.89□□□□□ -1.79
SPT23YKL020C YBR285WP38354 144 aa3.89□□□□□ -1.79
SPT23YKL020C GIP4P39732 760 aa3.89□□□□□ -1.79
SPT23YKL020C PAC1P39946 494 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C YER010CP40011 234 aa3.89□□□□□ -1.79
SPT23YKL020C YAT2P40017 923 aa3.89□□□□□ -1.79
SPT23YKL020C RGI2P40188 164 aa3.89□□□□□ -1.79
SPT23YKL020C CSM2P40465 213 aa3.89□□□□□ -1.79
SPT23YKL020C IBA57P47158 497 aa3.89□□□□□ -1.79
SPT23YKL020C TAD1P53065 400 aa3.89□□□□□ -1.79
SPT23YKL020C VOA1P53262 265 aa3.89□□□□□ -1.79
SPT23YKL020C TUB4P53378 473 aa3.89□□□□□ -1.79
SPT23YKL020C YMR027WQ04371 470 aa3.89□□□□□ -1.79
SPT23YKL020C YML083CQ04526 418 aa3.89□□□□□ -1.79
SPT23YKL020C YLR173WQ06247 608 aa3.89□□□□□ -1.79
SPT23YKL020C LUC7Q07508 261 aaPredicted RBP3.89□□□□□ -1.79
SPT23YKL020C GSH2Q08220 491 aa3.89□□□□□ -1.79
SPT23YKL020C DIA2Q08496 732 aaPredicted RBP3.89□□□□□ -1.79
SPT23YKL020C HER1Q12276 1246 aa3.89□□□□□ -1.79
SPT23YKL020C STB3Q12427 513 aa3.89□□□□□ -1.79
SPT23YKL020C PTC5Q12511 572 aa3.89□□□□□ -1.79
SPT23YKL020C YHR213W-AQ8TGT4 77 aa3.89□□□□□ -1.79
SPT23YKL020C TCP1P12612 559 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C RSA4P25382 515 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C BOS1P25385 244 aa3.89□□□□□ -1.79
SPT23YKL020C DBF4P32325 704 aa3.89□□□□□ -1.79
SPT23YKL020C TCA17P32613 152 aa3.89□□□□□ -1.79
SPT23YKL020C JEN1P36035 616 aa3.89□□□□□ -1.79
SPT23YKL020C YHR045WP38775 560 aa3.89□□□□□ -1.79
SPT23YKL020C TRM5P38793 499 aa3.89□□□□□ -1.79
SPT23YKL020C XDJ1P39102 459 aa3.89□□□□□ -1.79
SPT23YKL020C RSP5P39940 809 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C DIE2P50076 525 aa3.89□□□□□ -1.79
SPT23YKL020C NSA1P53136 463 aaPredicted RBP3.89□□□□□ -1.79
SPT23YKL020C SHY1P53266 389 aa3.89□□□□□ -1.79
SPT23YKL020C RPL6AQ02326 176 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C CWC27Q02770 301 aa3.89□□□□□ -1.79
SPT23YKL020C SHR3Q02774 210 aa3.89□□□□□ -1.79
SPT23YKL020C YMR187CQ03236 431 aa3.89□□□□□ -1.79
SPT23YKL020C SNX41Q04053 625 aa3.89□□□□□ -1.79
SPT23YKL020C RCO1Q04779 684 aa3.89□□□□□ -1.79
SPT23YKL020C RQC1Q05468 723 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C PEX10Q05568 337 aa3.89□□□□□ -1.79
SPT23YKL020C CDA1Q06702 301 aa3.89□□□□□ -1.79
SPT23YKL020C PSR2Q07949 397 aa3.89□□□□□ -1.79
SPT23YKL020C NBA1Q08229 501 aaKnown RBP3.89□□□□□ -1.79
SPT23YKL020C YPL272CQ08984 517 aa3.89□□□□□ -1.79
SPT23YKL020C YDL176WQ12027 708 aa3.89□□□□□ -1.79
SPT23YKL020C TGS1Q12052 315 aa3.89□□□□□ -1.79
SPT23YKL020C ULA1Q12059 462 aa3.89□□□□□ -1.79
SPT23YKL020C YOR214CQ12282 236 aa3.89□□□□□ -1.79
SPT23YKL020C ATP2P00830 511 aaKnown RBP3.88□□□□□ -1.79
SPT23YKL020C VPS33P20795 691 aa3.88□□□□□ -1.79
SPT23YKL020C AAT2P23542 418 aaKnown RBP3.88□□□□□ -1.79
SPT23YKL020C SED4P25365 1065 aa3.88□□□□□ -1.79
SPT23YKL020C CIN8P27895 1000 aa3.88□□□□□ -1.79
SPT23YKL020C CCR4P31384 837 aaKnown RBP3.88□□□□□ -1.79
SPT23YKL020C IRE1P32361 1115 aa3.88□□□□□ -1.79
SPT23YKL020C MDL1P33310 695 aa3.88□□□□□ -1.79
SPT23YKL020C PTC7P38797 343 aa3.88□□□□□ -1.79
SPT23YKL020C UBA4P38820 440 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms