RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W CDC14Q00684 551 aa6.15□□□□□ -1.42
PRE3YJL001W NGL3Q03210 505 aa6.15□□□□□ -1.42
PRE3YJL001W ARP9Q05123 467 aa6.15□□□□□ -1.42
PRE3YJL001W MCP2Q06567 569 aa6.15□□□□□ -1.42
PRE3YJL001W REH1Q06709 432 aa6.15□□□□□ -1.42
PRE3YJL001W TGL5Q12043 749 aa6.15□□□□□ -1.42
PRE3YJL001W GLE1Q12315 538 aa6.15□□□□□ -1.42
PRE3YJL001W PNS1Q12412 539 aa6.15□□□□□ -1.42
PRE3YJL001W RAD10P06838 210 aa6.14□□□□□ -1.43
PRE3YJL001W YSR3P23501 404 aa6.14□□□□□ -1.43
PRE3YJL001W PHO84P25297 587 aaKnown RBP6.14□□□□□ -1.43
PRE3YJL001W PCL2P25693 308 aa6.14□□□□□ -1.43
PRE3YJL001W PLC1P32383 869 aa6.14□□□□□ -1.43
PRE3YJL001W CDC13P32797 924 aaKnown RBP6.14□□□□□ -1.43
PRE3YJL001W RAD5P32849 1169 aaPredicted RBP6.14□□□□□ -1.43
PRE3YJL001W TAF14P35189 244 aa6.14□□□□□ -1.43
PRE3YJL001W HIS2P38635 335 aa6.14□□□□□ -1.43
PRE3YJL001W DED81P38707 554 aaKnown RBP6.14□□□□□ -1.43
PRE3YJL001W SAW1P39735 261 aa6.14□□□□□ -1.43
PRE3YJL001W YAT2P40017 923 aa6.14□□□□□ -1.43
PRE3YJL001W ARG2P40360 574 aa6.14□□□□□ -1.43
PRE3YJL001W MND2P40577 368 aa6.14□□□□□ -1.43
PRE3YJL001W ATG36P46983 293 aa6.14□□□□□ -1.43
PRE3YJL001W SSY1Q03770 852 aa6.14□□□□□ -1.43
PRE3YJL001W XYL2Q07993 356 aa6.14□□□□□ -1.43
PRE3YJL001W NEW1Q08972 1196 aaKnown RBP6.14□□□□□ -1.43
PRE3YJL001W GPR1Q12361 961 aa6.14□□□□□ -1.43
PRE3YJL001W HRP1Q99383 534 aaKnown RBP6.14□□□□□ -1.43
PRE3YJL001W AI5_ALPHAQ9ZZX1 630 aa6.14□□□□□ -1.43
PRE3YJL001W KIN2P13186 1147 aaKnown RBP6.13□□□□□ -1.43
PRE3YJL001W SLY1P22213 666 aa6.13□□□□□ -1.43
PRE3YJL001W YSP3P25036 478 aa6.13□□□□□ -1.43
PRE3YJL001W BLI1P35727 113 aa6.13□□□□□ -1.43
PRE3YJL001W MPE1P35728 441 aaKnown RBP6.13□□□□□ -1.43
PRE3YJL001W PCL5P38794 229 aa6.13□□□□□ -1.43
PRE3YJL001W SET5P38890 526 aaKnown RBP6.13□□□□□ -1.43
PRE3YJL001W YMR124WP39523 943 aaKnown RBP6.13□□□□□ -1.43
PRE3YJL001W DJP1P40564 432 aa6.13□□□□□ -1.43
PRE3YJL001W TFG2P41896 400 aaPredicted RBP6.13□□□□□ -1.43
PRE3YJL001W ALY2P47029 1046 aa6.13□□□□□ -1.43
PRE3YJL001W MET14Q02196 202 aa6.13□□□□□ -1.43
PRE3YJL001W ENT2Q05785 613 aa6.13□□□□□ -1.43
PRE3YJL001W NRT1Q08485 598 aa6.13□□□□□ -1.43
PRE3YJL001W FAP7Q12055 197 aaPredicted RBP6.13□□□□□ -1.43
PRE3YJL001W YLL056CQ12177 298 aa6.13□□□□□ -1.43
PRE3YJL001W IPP1P00817 287 aaKnown RBP6.12□□□□□ -1.43
PRE3YJL001W CPA1P07258 411 aaKnown RBP6.12□□□□□ -1.43
PRE3YJL001W ERG11P10614 530 aa6.12□□□□□ -1.43
PRE3YJL001W NTH1P32356 751 aa6.12□□□□□ -1.43
PRE3YJL001W SKN1P33336 771 aa6.12□□□□□ -1.43
PRE3YJL001W RRT2P38332 387 aa6.12□□□□□ -1.43
PRE3YJL001W DIA4P38705 446 aaPredicted RBP6.12□□□□□ -1.43
PRE3YJL001W GND1P38720 489 aaKnown RBP6.12□□□□□ -1.43
PRE3YJL001W FAU1P40099 211 aa6.12□□□□□ -1.43
PRE3YJL001W LRO1P40345 661 aa6.12□□□□□ -1.43
PRE3YJL001W BRO1P48582 844 aa6.12□□□□□ -1.43
PRE3YJL001W VPS75P53853 264 aa6.12□□□□□ -1.43
PRE3YJL001W RHO3Q00245 231 aaKnown RBP6.12□□□□□ -1.43
PRE3YJL001W SNP1Q00916 300 aaPredicted RBP6.12□□□□□ -1.43
PRE3YJL001W NUP100Q02629 959 aa6.12□□□□□ -1.43
PRE3YJL001W ARX1Q03862 593 aaKnown RBP6.12□□□□□ -1.43
PRE3YJL001W GSF2Q04697 403 aaKnown RBP6.12□□□□□ -1.43
PRE3YJL001W BUD7Q08754 746 aa6.12□□□□□ -1.43
PRE3YJL001W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43 RIP-Chip
PRE3YJL001W GCD1P09032 578 aaPredicted RBP6.11□□□□□ -1.43
PRE3YJL001W VPS34P22543 875 aa6.11□□□□□ -1.43
PRE3YJL001W LDB16P25587 256 aa6.11□□□□□ -1.43
PRE3YJL001W MRPL9P31334 269 aa6.11□□□□□ -1.43
PRE3YJL001W HOG1P32485 435 aa6.11□□□□□ -1.43
PRE3YJL001W YBL055CP34220 418 aaPredicted RBP6.11□□□□□ -1.43
PRE3YJL001W LYS1P38998 373 aaRIP-Chip data6.11□□□□□ -1.43not detected
PRE3YJL001W SPC72P39723 622 aa6.11□□□□□ -1.43
PRE3YJL001W YEL073CP39974 107 aa6.11□□□□□ -1.43
PRE3YJL001W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
PRE3YJL001W GPG1P53130 126 aa6.11□□□□□ -1.43
PRE3YJL001W ARP4P80428 489 aa6.11□□□□□ -1.43
PRE3YJL001W RSM24Q03976 319 aa6.11□□□□□ -1.43
PRE3YJL001W VID22Q05934 901 aa6.11□□□□□ -1.43
PRE3YJL001W OPY2Q06810 360 aa6.11□□□□□ -1.43
PRE3YJL001W YOL024WQ08172 172 aa6.11□□□□□ -1.43
PRE3YJL001W TMA17Q12513 150 aa6.11□□□□□ -1.43
PRE3YJL001W RRP12Q12754 1228 aaKnown RBP6.11□□□□□ -1.43
PRE3YJL001W MVD1P32377 396 aaKnown RBP6.1□□□□□ -1.43
PRE3YJL001W IMP3P32899 183 aaPredicted RBP6.1□□□□□ -1.43
PRE3YJL001W CTF13P35203 478 aa6.1□□□□□ -1.43
PRE3YJL001W LDB7P38210 180 aa6.1□□□□□ -1.43
PRE3YJL001W RGI2P40188 164 aa6.1□□□□□ -1.43
PRE3YJL001W ARE2P53629 642 aaKnown RBP6.1□□□□□ -1.43
PRE3YJL001W JJJ1P53863 590 aa6.1□□□□□ -1.43
PRE3YJL001W ERG5P54781 538 aa6.1□□□□□ -1.43
PRE3YJL001W ECM9Q02202 377 aa6.1□□□□□ -1.43
PRE3YJL001W ROT1Q03691 256 aa6.1□□□□□ -1.43
PRE3YJL001W SIZ1Q04195 904 aa6.1□□□□□ -1.43
PRE3YJL001W HFD1Q04458 532 aa6.1□□□□□ -1.43
PRE3YJL001W RCO1Q04779 684 aa6.1□□□□□ -1.43
PRE3YJL001W YLR030WQ07967 263 aa6.1□□□□□ -1.43
PRE3YJL001W ATG9Q12142 997 aa6.1□□□□□ -1.43
PRE3YJL001W YDR018CQ12185 396 aa6.1□□□□□ -1.43
PRE3YJL001W CYC7P00045 113 aa6.09□□□□□ -1.43
PRE3YJL001W PMS1P14242 873 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms