RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W YLR413WQ06689 675 aa7.41□□□□□ -1.22
PEX28YHR150W GPB1Q08886 897 aa7.41□□□□□ -1.22
PEX28YHR150W YLL054CQ12244 843 aa7.41□□□□□ -1.22
PEX28YHR150W HIP1P06775 603 aa7.4□□□□□ -1.23
PEX28YHR150W YAP1P19880 650 aaKnown RBP7.4□□□□□ -1.23
PEX28YHR150W DMC1P25453 334 aa7.4□□□□□ -1.23
PEX28YHR150W SRL3P36167 246 aa7.4□□□□□ -1.23
PEX28YHR150W MRPL40P36534 297 aa7.4□□□□□ -1.23
PEX28YHR150W YHL012WP38709 493 aa7.4□□□□□ -1.23
PEX28YHR150W THO1P40040 218 aaKnown RBP7.4□□□□□ -1.23
PEX28YHR150W IST3P40565 148 aaPredicted RBP7.4□□□□□ -1.23
PEX28YHR150W IRC5P43610 853 aa7.4□□□□□ -1.23
PEX28YHR150W GUS1P46655 708 aaKnown RBP RIP-Chip data7.4□□□□□ -1.23not detected
PEX28YHR150W GCD14P46959 383 aaPredicted RBP7.4□□□□□ -1.23
PEX28YHR150W UPF3P48412 387 aaKnown RBP7.4□□□□□ -1.23
PEX28YHR150W STR3P53101 465 aaKnown RBP7.4□□□□□ -1.23
PEX28YHR150W MET13P53128 600 aa7.4□□□□□ -1.23
PEX28YHR150W HEH2Q03281 663 aa7.4□□□□□ -1.23
PEX28YHR150W TFB3Q03290 321 aa7.4□□□□□ -1.23
PEX28YHR150W ORM2Q06144 216 aa7.4□□□□□ -1.23
PEX28YHR150W GPI11Q06636 219 aa7.4□□□□□ -1.23
PEX28YHR150W UAF30Q08747 228 aa7.4□□□□□ -1.23
PEX28YHR150W YOR387CQ08910 206 aa7.4□□□□□ -1.23
PEX28YHR150W RSA1Q08932 381 aa7.4□□□□□ -1.23
PEX28YHR150W SPS1P08458 490 aa7.39□□□□□ -1.23
PEX28YHR150W SST2P11972 698 aaKnown RBP7.39□□□□□ -1.23
PEX28YHR150W CBS2P14905 389 aa7.39□□□□□ -1.23
PEX28YHR150W TEC1P18412 486 aa7.39□□□□□ -1.23
PEX28YHR150W CMK2P22517 447 aa7.39□□□□□ -1.23
PEX28YHR150W MIH1P23748 554 aa7.39□□□□□ -1.23
PEX28YHR150W SGF29P25554 259 aa7.39□□□□□ -1.23
PEX28YHR150W IMP3P32899 183 aaPredicted RBP7.39□□□□□ -1.23
PEX28YHR150W NTR2P36118 322 aaPredicted RBP7.39□□□□□ -1.23
PEX28YHR150W ACO2P39533 789 aa7.39□□□□□ -1.23
PEX28YHR150W RBG1P39729 369 aa7.39□□□□□ -1.23
PEX28YHR150W FMP10P40098 244 aa7.39□□□□□ -1.23
PEX28YHR150W KTR7P40504 517 aa7.39□□□□□ -1.23
PEX28YHR150W FKH2P41813 862 aa7.39□□□□□ -1.23
PEX28YHR150W PTR3P43606 678 aa7.39□□□□□ -1.23
PEX28YHR150W ARP4P80428 489 aa7.39□□□□□ -1.23
PEX28YHR150W TOF2Q02208 771 aa7.39□□□□□ -1.23
PEX28YHR150W SPP2Q02521 185 aa7.39□□□□□ -1.23
PEX28YHR150W UGO1Q03327 502 aa7.39□□□□□ -1.23
PEX28YHR150W RSN1Q03516 953 aa7.39□□□□□ -1.23
PEX28YHR150W RCO1Q04779 684 aa7.39□□□□□ -1.23
PEX28YHR150W RRP15Q06511 250 aaPredicted RBP7.39□□□□□ -1.23
PEX28YHR150W YDL121CQ07541 149 aa7.39□□□□□ -1.23
PEX28YHR150W YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
PEX28YHR150W YPQ1Q12010 308 aa7.39□□□□□ -1.23
PEX28YHR150W ICT1Q12385 394 aa7.39□□□□□ -1.23
PEX28YHR150W AHA1Q12449 350 aaKnown RBP7.39□□□□□ -1.23
PEX28YHR150W PFK27Q12471 397 aaPredicted RBP7.39□□□□□ -1.23
PEX28YHR150W BRR1Q99177 341 aaPredicted RBP7.39□□□□□ -1.23
PEX28YHR150W YLR149CQ99296 730 aa7.39□□□□□ -1.23
PEX28YHR150W TOP3P13099 656 aa7.38□□□□□ -1.23
PEX28YHR150W IDI1P15496 288 aa7.38□□□□□ -1.23
PEX28YHR150W CLB3P24870 427 aa7.38□□□□□ -1.23
PEX28YHR150W PUP3P25451 205 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W PEX3P28795 441 aa7.38□□□□□ -1.23
PEX28YHR150W SYN8P31377 255 aa7.38□□□□□ -1.23
PEX28YHR150W NTG1P31378 399 aa7.38□□□□□ -1.23
PEX28YHR150W COX13P32799 129 aa7.38□□□□□ -1.23
PEX28YHR150W CTF13P35203 478 aa7.38□□□□□ -1.23
PEX28YHR150W CAF4P36130 643 aa7.38□□□□□ -1.23
PEX28YHR150W DSF2P38213 736 aa7.38□□□□□ -1.23
PEX28YHR150W SRP72P38688 640 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W STB5P38699 743 aa7.38□□□□□ -1.23
PEX28YHR150W PEX18P38855 283 aa7.38□□□□□ -1.23
PEX28YHR150W IES5P40060 125 aa7.38□□□□□ -1.23
PEX28YHR150W SWP82P43554 623 aa7.38□□□□□ -1.23
PEX28YHR150W BFA1P47113 574 aa7.38□□□□□ -1.23
PEX28YHR150W CSN12P47130 423 aa7.38□□□□□ -1.23
PEX28YHR150W MTR3P48240 250 aaPredicted RBP7.38□□□□□ -1.23
PEX28YHR150W ESF2P53743 316 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W SPR6Q01684 191 aa7.38□□□□□ -1.23
PEX28YHR150W SVL3Q03088 825 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W GPI17Q04080 534 aa7.38□□□□□ -1.23
PEX28YHR150W NDL1Q06568 189 aa7.38□□□□□ -1.23
PEX28YHR150W YKL018C-AQ3E7A7 99 aa7.38□□□□□ -1.23
PEX28YHR150W CBP2P03874 630 aaPredicted RBP7.38□□□□□ -1.23
PEX28YHR150W SCH9P11792 824 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W MTF1P14908 341 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W EMC1P25574 760 aa7.38□□□□□ -1.23
PEX28YHR150W GUT2P32191 649 aa7.38□□□□□ -1.23
PEX28YHR150W DHH1P39517 506 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W ALG8P40351 577 aa7.38□□□□□ -1.23
PEX28YHR150W YIL161WP40449 235 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W TES1P41903 349 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W RMD8P43620 662 aa7.38□□□□□ -1.23
PEX28YHR150W AMA1P50082 593 aa7.38□□□□□ -1.23
PEX28YHR150W YPT32P51996 222 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W MMT1Q03218 510 aa7.38□□□□□ -1.23
PEX28YHR150W CLU1Q03690 1277 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W YHC1Q05900 231 aaKnown RBP7.38□□□□□ -1.23
PEX28YHR150W YDL114WQ07530 308 aa7.38□□□□□ -1.23
PEX28YHR150W JLP1Q12358 412 aa7.38□□□□□ -1.23
PEX28YHR150W TIM9O74700 87 aa7.37□□□□□ -1.23
PEX28YHR150W ARF2P19146 181 aaKnown RBP7.37□□□□□ -1.23
PEX28YHR150W VMA6P32366 345 aaKnown RBP7.37□□□□□ -1.23
PEX28YHR150W NUP2P32499 720 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms