RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	UAF30	Q08747	228 aa		4.38	□□□□□ -1.71
VMA22	YHR060W	LCB4	Q12246	624 aa		4.38	□□□□□ -1.71
VMA22	YHR060W	INO80	P53115	1489 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	PPR1	P07272	904 aa	Predicted RBP	4.37	□□□□□ -1.71
VMA22	YHR060W	ALG7	P07286	448 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	LPD1	P09624	499 aa	Known RBP	4.37	□□□□□ -1.71
VMA22	YHR060W	URA4	P20051	364 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	AMD2	P22580	549 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	RAD14	P28519	371 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	MRPL9	P31334	269 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	SUR1	P33300	382 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	MNN2	P38069	597 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	ARA1	P38115	344 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	YSW1	P38280	609 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	YHR131C	P38835	850 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	SPT8	P38915	602 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	ELO1	P39540	310 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	NAS2	P40555	220 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	OPT1	P40897	799 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	YJL107C	P42947	387 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	YJL132W	P47014	750 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	NET1	P47035	1189 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	TRS23	Q03784	219 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	PLM2	Q04383	521 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	YML053C	Q04978	212 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	YFH1	Q07540	174 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	YLR040C	Q07988	224 aa		4.37	□□□□□ -1.71
VMA22	YHR060W	APL5	Q08951	932 aa	Known RBP	4.37	□□□□□ -1.71
VMA22	YHR060W	ARG81	P05085	880 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	RPL31B	P0C2H9	113 aa	Known RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	MRP13	P12686	339 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	TAL1	P15019	335 aa	Known RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	OM45	P16547	393 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	CLN1	P20437	546 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	PPH22	P23595	377 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	SNT1	P25357	1226 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	MCM4	P30665	933 aa	Known RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	AFG1	P32317	509 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	YBL055C	P34220	418 aa	Predicted RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	MRPL4	P36517	319 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	YPT10	P38146	199 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	YDR089W	P38966	869 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	OSW5	P40219	148 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	MKT1	P40850	830 aa	Known RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	PMT6	P42934	759 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	ERG26	P53199	349 aa	Known RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	CAF130	P53280	1122 aa	Predicted RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	COQ6	P53318	479 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	RHO5	P53879	331 aa	Known RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	AQR1	P53943	586 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	ACL4	Q03771	387 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	NOP6	Q07623	225 aa	Known RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	CEX1	Q12453	761 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	ZPS1	Q12512	249 aa		4.36	□□□□□ -1.71
VMA22	YHR060W	BRR1	Q99177	341 aa	Predicted RBP	4.36	□□□□□ -1.71
VMA22	YHR060W	PDE2	P06776	526 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	RHO2	P06781	192 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	PCT1	P13259	424 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	STE4	P18851	423 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	PHO91	P27514	894 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	NDI1	P32340	513 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	GMH1	P36125	273 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	NUP133	P36161	1157 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	ADH5	P38113	351 aa	Known RBP	4.35	□□□□□ -1.71
VMA22	YHR060W	THI2	P38141	450 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	DBP8	P38719	431 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	CHS7	P38843	316 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	RIX1	P38883	763 aa	Predicted RBP	4.35	□□□□□ -1.71
VMA22	YHR060W	ALK1	P43633	760 aa	Known RBP	4.35	□□□□□ -1.71
VMA22	YHR060W	BPL1	P48445	690 aa	Predicted RBP	4.35	□□□□□ -1.71
VMA22	YHR060W	SHE10	P53075	577 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	YNL092W	P53934	400 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	YDR179W-A	Q03983	463 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	RRB1	Q04225	511 aa	Known RBP	4.35	□□□□□ -1.71
VMA22	YHR060W	RBA50	Q04418	439 aa		4.35	□□□□□ -1.71
VMA22	YHR060W	RRP36	Q12481	300 aa	Predicted RBP	4.35	□□□□□ -1.71
VMA22	YHR060W	GPH1	P06738	902 aa	Known RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	MRP2	P10663	115 aa	Predicted RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	KGD1	P20967	1014 aa	Known RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	RNR3	P21672	869 aa	Known RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	BUD5	P25300	642 aa	Predicted RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	GDA1	P32621	518 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	TSC10	P38342	320 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	RPA34	P47006	233 aa	Predicted RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	COP1	P53622	1201 aa	Known RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	TIM44	Q01852	431 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	EGD1	Q02642	157 aa	Known RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	YMR178W	Q03219	274 aa	Known RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	WAR1	Q03631	944 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	DCS1	Q06151	350 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	TEN1	Q07921	160 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	PML1	Q07930	204 aa	Predicted RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	SIL1	Q08199	421 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	LEA1	Q08963	238 aa	Predicted RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	ATG9	Q12142	997 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	ACF2	Q12168	779 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	UBX3	Q12229	455 aa		4.34	□□□□□ -1.71
VMA22	YHR060W	MDM20	Q12387	796 aa	Known RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	PFK27	Q12471	397 aa	Predicted RBP	4.34	□□□□□ -1.71
VMA22	YHR060W	MTR10	Q99189	972 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms