RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W PPX1P38698 397 aa11.09□□□□□ -0.63
SNF6YHL025W CCT6P39079 546 aa11.09□□□□□ -0.63
SNF6YHL025W PIK1P39104 1066 aa11.09□□□□□ -0.63
SNF6YHL025W ALG5P40350 334 aa11.09□□□□□ -0.63
SNF6YHL025W MET18P40469 1032 aa11.09□□□□□ -0.63
SNF6YHL025W IAH1P41734 238 aa11.09□□□□□ -0.63
SNF6YHL025W GCD10P41814 478 aa11.09□□□□□ -0.63
SNF6YHL025W COS4P43542 379 aa11.09□□□□□ -0.63
SNF6YHL025W ZRG17P53735 605 aa11.09□□□□□ -0.63
SNF6YHL025W EMI1Q04406 187 aa11.09□□□□□ -0.63
SNF6YHL025W ARG7Q04728 441 aa11.09□□□□□ -0.63
SNF6YHL025W SNX3Q08826 162 aaKnown RBP11.09□□□□□ -0.63
SNF6YHL025W SAS5Q99314 248 aa11.09□□□□□ -0.63
SNF6YHL025W Q0182Q9ZZW1 134 aa11.09□□□□□ -0.63
SNF6YHL025W POL30P15873 258 aaKnown RBP11.08□□□□□ -0.64
SNF6YHL025W TRM5P38793 499 aa11.08□□□□□ -0.64
SNF6YHL025W UBA4P38820 440 aa11.08□□□□□ -0.64
SNF6YHL025W SPF1P39986 1215 aaKnown RBP11.08□□□□□ -0.64
SNF6YHL025W LSM5P40089 93 aaKnown RBP11.08□□□□□ -0.64
SNF6YHL025W STB2P46679 850 aa11.08□□□□□ -0.64
SNF6YHL025W NAS6P50086 228 aa11.08□□□□□ -0.64
SNF6YHL025W NBP35P52920 328 aa11.08□□□□□ -0.64
SNF6YHL025W IMA1P53051 589 aa11.08□□□□□ -0.64
SNF6YHL025W HPF1Q05164 967 aa11.08□□□□□ -0.64
SNF6YHL025W YLR413WQ06689 675 aa11.08□□□□□ -0.64
SNF6YHL025W CDA1Q06702 301 aa11.08□□□□□ -0.64
SNF6YHL025W OPI10Q08202 246 aa11.08□□□□□ -0.64
SNF6YHL025W GPN2Q08726 347 aaPredicted RBP11.08□□□□□ -0.64
SNF6YHL025W UAF30Q08747 228 aa11.08□□□□□ -0.64
SNF6YHL025W PHO91P27514 894 aa11.07□□□□□ -0.64
SNF6YHL025W YBL029WP38201 376 aa11.07□□□□□ -0.64
SNF6YHL025W MPS2P53159 387 aa11.07□□□□□ -0.64
SNF6YHL025W YGR053CP53234 283 aa11.07□□□□□ -0.64
SNF6YHL025W COG2P53271 262 aa11.07□□□□□ -0.64
SNF6YHL025W HST3P53687 447 aa11.07□□□□□ -0.64
SNF6YHL025W YNL035CP53962 389 aaKnown RBP11.07□□□□□ -0.64
SNF6YHL025W YDR476CQ03362 224 aa11.07□□□□□ -0.64
SNF6YHL025W SAM4Q08985 325 aaKnown RBP11.07□□□□□ -0.64
SNF6YHL025W RRP42Q12277 265 aaPredicted RBP11.07□□□□□ -0.64
SNF6YHL025W PST1Q12355 444 aa11.07□□□□□ -0.64
SNF6YHL025W INH1P01097 85 aa11.06□□□□□ -0.64
SNF6YHL025W STE3P06783 470 aa11.06□□□□□ -0.64
SNF6YHL025W VPS34P22543 875 aa11.06□□□□□ -0.64
SNF6YHL025W YCK2P23292 546 aaKnown RBP11.06□□□□□ -0.64
SNF6YHL025W YSR3P23501 404 aa11.06□□□□□ -0.64
SNF6YHL025W ATP11P32453 318 aa11.06□□□□□ -0.64
SNF6YHL025W CBF5P33322 483 aaKnown RBP RIP-Chip data11.06□□□□□ -0.64not detected
SNF6YHL025W SDH3P33421 198 aa11.06□□□□□ -0.64
SNF6YHL025W FRE2P36033 711 aa11.06□□□□□ -0.64
SNF6YHL025W ARB1P40024 610 aaKnown RBP11.06□□□□□ -0.64
SNF6YHL025W MTR3P48240 250 aaPredicted RBP11.06□□□□□ -0.64
SNF6YHL025W ARC35P53731 342 aaKnown RBP11.06□□□□□ -0.64
SNF6YHL025W PRP38Q00723 242 aaPredicted RBP11.06□□□□□ -0.64
SNF6YHL025W YMR111CQ04461 462 aaPredicted RBP11.06□□□□□ -0.64
SNF6YHL025W BCP1Q06338 283 aa11.06□□□□□ -0.64
SNF6YHL025W MCH5Q08777 521 aa11.06□□□□□ -0.64
SNF6YHL025W TRM8Q12009 286 aa11.06□□□□□ -0.64
SNF6YHL025W VPS68Q12016 184 aa11.06□□□□□ -0.64
SNF6YHL025W AI3P03877 415 aa11.05□□□□□ -0.64
SNF6YHL025W SPS22P25380 463 aa11.05□□□□□ -0.64
SNF6YHL025W CAF4P36130 643 aa11.05□□□□□ -0.64
SNF6YHL025W GIP1P38229 639 aa11.05□□□□□ -0.64
SNF6YHL025W FTH1P38310 465 aa11.05□□□□□ -0.64
SNF6YHL025W GIC1P38785 314 aa11.05□□□□□ -0.64
SNF6YHL025W BIR1P47134 954 aa11.05□□□□□ -0.64
SNF6YHL025W ILM1P47155 203 aa11.05□□□□□ -0.64
SNF6YHL025W YPT32P51996 222 aaKnown RBP11.05□□□□□ -0.64
SNF6YHL025W YGR015CP53208 328 aa11.05□□□□□ -0.64
SNF6YHL025W PRO2P54885 456 aaKnown RBP11.05□□□□□ -0.64
SNF6YHL025W SMA1Q02651 245 aa11.05□□□□□ -0.64
SNF6YHL025W RAD34Q06665 692 aa11.05□□□□□ -0.64
SNF6YHL025W SGT1Q08446 395 aa11.05□□□□□ -0.64
SNF6YHL025W FUM1P08417 488 aaKnown RBP11.04□□□□□ -0.64
SNF6YHL025W PDC5P16467 563 aaKnown RBP11.04□□□□□ -0.64
SNF6YHL025W CLN2P20438 545 aa11.04□□□□□ -0.64
SNF6YHL025W REC107P21651 314 aa11.04□□□□□ -0.64
SNF6YHL025W CCR4P31384 837 aaKnown RBP11.04□□□□□ -0.64
SNF6YHL025W RMA1P36001 430 aaKnown RBP11.04□□□□□ -0.64
SNF6YHL025W TCD2P36101 447 aaKnown RBP11.04□□□□□ -0.64
SNF6YHL025W SOL2P37262 315 aa11.04□□□□□ -0.64
SNF6YHL025W ECM1P39715 212 aa11.04□□□□□ -0.64
SNF6YHL025W GIP4P39732 760 aa11.04□□□□□ -0.64
SNF6YHL025W YEL073CP39974 107 aa11.04□□□□□ -0.64
SNF6YHL025W JEM1P40358 645 aa11.04□□□□□ -0.64
SNF6YHL025W YJR149WP47177 404 aa11.04□□□□□ -0.64
SNF6YHL025W COQ5P49017 307 aa11.04□□□□□ -0.64
SNF6YHL025W MDM34P53083 459 aa11.04□□□□□ -0.64
SNF6YHL025W YNL260CP53846 198 aa11.04□□□□□ -0.64
SNF6YHL025W VHS1Q03785 461 aa11.04□□□□□ -0.64
SNF6YHL025W IOC2Q12072 812 aa11.04□□□□□ -0.64
SNF6YHL025W NSL1Q12143 216 aa11.04□□□□□ -0.64
SNF6YHL025W NHA1Q99271 985 aa11.04□□□□□ -0.64
SNF6YHL025W HXK2P04807 486 aaKnown RBP11.03□□□□□ -0.64
SNF6YHL025W SPT15P13393 240 aaKnown RBP11.03□□□□□ -0.64
SNF6YHL025W OCA4P25366 362 aa11.03□□□□□ -0.64
SNF6YHL025W ZIP1P31111 875 aa11.03□□□□□ -0.64
SNF6YHL025W YHR127WP38833 243 aaKnown RBP11.03□□□□□ -0.64
SNF6YHL025W PCF11P39081 626 aaPredicted RBP11.03□□□□□ -0.64
SNF6YHL025W GIM4P40005 111 aaKnown RBP11.03□□□□□ -0.64
SNF6YHL025W SEC27P41811 889 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms