RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C GCY1P14065 312 aaKnown RBP RIP-Chip data12.87□□□□□ -0.35not detected
SHU1YHL006C RPO26P20435 155 aa12.87□□□□□ -0.35
SHU1YHL006C BUB3P26449 341 aa12.87□□□□□ -0.35
SHU1YHL006C YME1P32795 747 aa12.87□□□□□ -0.35
SHU1YHL006C PET112P33893 541 aa12.87□□□□□ -0.35
SHU1YHL006C SSP120P39931 234 aaKnown RBP12.87□□□□□ -0.35
SHU1YHL006C SMX2P40204 77 aaKnown RBP12.87□□□□□ -0.35
SHU1YHL006C RNY1Q02933 434 aaKnown RBP12.87□□□□□ -0.35
SHU1YHL006C YMR209CQ03648 457 aa12.87□□□□□ -0.35
SHU1YHL006C VAM6Q07468 1049 aa12.87□□□□□ -0.35
SHU1YHL006C FRA1Q07825 749 aa12.87□□□□□ -0.35
SHU1YHL006C ATG29Q12092 213 aa12.87□□□□□ -0.35
SHU1YHL006C CHS5Q12114 671 aaKnown RBP12.87□□□□□ -0.35
SHU1YHL006C MDY2Q12285 212 aa12.87□□□□□ -0.35
SHU1YHL006C RGS2Q99188 309 aa12.87□□□□□ -0.35
SHU1YHL006C SSC1P0CS90 654 aaKnown RBP12.86□□□□□ -0.35
SHU1YHL006C SDH3P33421 198 aa12.86□□□□□ -0.35
SHU1YHL006C MIC19P43594 170 aa12.86□□□□□ -0.35
SHU1YHL006C GCD14P46959 383 aaPredicted RBP12.86□□□□□ -0.35
SHU1YHL006C NHP10Q03435 203 aa12.86□□□□□ -0.35
SHU1YHL006C BCH1Q05029 724 aa12.86□□□□□ -0.35
SHU1YHL006C MCD1Q12158 566 aa12.86□□□□□ -0.35
SHU1YHL006C BCY1P07278 416 aaKnown RBP12.85□□□□□ -0.35
SHU1YHL006C LAT1P12695 482 aaKnown RBP12.85□□□□□ -0.35
SHU1YHL006C PRP2P20095 876 aaPredicted RBP12.85□□□□□ -0.35
SHU1YHL006C RPB4P20433 221 aaPredicted RBP12.85□□□□□ -0.35
SHU1YHL006C NUP120P35729 1037 aa12.85□□□□□ -0.35
SHU1YHL006C DMA1P38823 416 aa12.85□□□□□ -0.35
SHU1YHL006C SPC97P38863 823 aa12.85□□□□□ -0.35
SHU1YHL006C DHH1P39517 506 aaKnown RBP12.85□□□□□ -0.35
SHU1YHL006C YJR030CP47101 745 aa12.85□□□□□ -0.35
SHU1YHL006C YJR039WP47107 1121 aa12.85□□□□□ -0.35
SHU1YHL006C PMT3P47190 753 aa12.85□□□□□ -0.35
SHU1YHL006C BIO4P53630 237 aa12.85□□□□□ -0.35
SHU1YHL006C HPT1Q04178 221 aaKnown RBP12.85□□□□□ -0.35
SHU1YHL006C YPL247CQ12523 523 aa12.85□□□□□ -0.35
SHU1YHL006C RSR1P13856 272 aa12.84□□□□□ -0.35
SHU1YHL006C SFA1P32771 386 aa12.84□□□□□ -0.35
SHU1YHL006C ASK1P35734 292 aa12.84□□□□□ -0.35
SHU1YHL006C RRP14P36080 434 aaKnown RBP12.84□□□□□ -0.35
SHU1YHL006C BEM4P39011 633 aa12.84□□□□□ -0.35
SHU1YHL006C MGS1P40151 587 aa12.84□□□□□ -0.35
SHU1YHL006C NDE1P40215 560 aa12.84□□□□□ -0.35
SHU1YHL006C PEP8P40335 379 aa12.84□□□□□ -0.35
SHU1YHL006C TFG1P41895 735 aaPredicted RBP12.84□□□□□ -0.35
SHU1YHL006C MDM34P53083 459 aa12.84□□□□□ -0.35
SHU1YHL006C RSM10Q03201 203 aa12.84□□□□□ -0.35
SHU1YHL006C RGT2Q12300 763 aa12.84□□□□□ -0.35
SHU1YHL006C GCN1P33892 2672 aaKnown RBP12.83□□□□□ -0.36
SHU1YHL006C STE3P06783 470 aa12.83□□□□□ -0.36
SHU1YHL006C ILV2P07342 687 aaKnown RBP12.83□□□□□ -0.36
SHU1YHL006C HOP09932 586 aa12.83□□□□□ -0.36
SHU1YHL006C AGP1P25376 633 aa12.83□□□□□ -0.36
SHU1YHL006C PRO1P32264 428 aa12.83□□□□□ -0.36
SHU1YHL006C MVD1P32377 396 aaKnown RBP12.83□□□□□ -0.36
SHU1YHL006C FAU1P40099 211 aa12.83□□□□□ -0.36
SHU1YHL006C LEU9Q12166 604 aaKnown RBP12.83□□□□□ -0.36
SHU1YHL006C HAL9Q12180 1030 aa12.83□□□□□ -0.36
SHU1YHL006C TY4A-HQ6Q5P6 413 aa12.83□□□□□ -0.36
SHU1YHL006C COX6P00427 148 aa12.82□□□□□ -0.36
SHU1YHL006C SIN4P32259 974 aa12.82□□□□□ -0.36
SHU1YHL006C RIM101P33400 625 aa12.82□□□□□ -0.36
SHU1YHL006C YKL100CP34248 587 aa12.82□□□□□ -0.36
SHU1YHL006C EHT1P38295 451 aa12.82□□□□□ -0.36
SHU1YHL006C GGC1P38988 300 aa12.82□□□□□ -0.36
SHU1YHL006C YJL206CP39529 758 aa12.82□□□□□ -0.36
SHU1YHL006C PTC2P39966 464 aaKnown RBP12.82□□□□□ -0.36
SHU1YHL006C AZF1P41696 914 aa12.82□□□□□ -0.36
SHU1YHL006C URB2P47108 1174 aa12.82□□□□□ -0.36
SHU1YHL006C KXD1P53158 218 aa12.82□□□□□ -0.36
SHU1YHL006C TAF11Q04226 346 aa12.82□□□□□ -0.36
SHU1YHL006C IRC13Q08630 104 aa12.82□□□□□ -0.36
SHU1YHL006C YPR022CQ12139 1133 aa12.82□□□□□ -0.36
SHU1YHL006C RRP42Q12277 265 aaPredicted RBP12.82□□□□□ -0.36
SHU1YHL006C PNO1Q99216 274 aaKnown RBP12.82□□□□□ -0.36
SHU1YHL006C AI4P03878 556 aa12.81□□□□□ -0.36
SHU1YHL006C VRP1P37370 817 aa12.81□□□□□ -0.36
SHU1YHL006C FTH1P38310 465 aa12.81□□□□□ -0.36
SHU1YHL006C MTG2P38860 518 aa12.81□□□□□ -0.36
SHU1YHL006C MET30P39014 640 aa12.81□□□□□ -0.36
SHU1YHL006C EMP65P40085 556 aa12.81□□□□□ -0.36
SHU1YHL006C VRG4P40107 337 aa12.81□□□□□ -0.36
SHU1YHL006C YRB1P41920 201 aaKnown RBP12.81□□□□□ -0.36
SHU1YHL006C TRM9P49957 279 aa12.81□□□□□ -0.36
SHU1YHL006C YGR266WP53326 701 aa12.81□□□□□ -0.36
SHU1YHL006C SRN2Q99176 213 aa12.81□□□□□ -0.36
SHU1YHL006C PRP8P33334 2413 aaKnown RBP12.8□□□□□ -0.36
SHU1YHL006C SEC15P22224 910 aa12.8□□□□□ -0.36
SHU1YHL006C PHA2P32452 334 aa12.8□□□□□ -0.36
SHU1YHL006C YIL086CP40503 102 aa12.8□□□□□ -0.36
SHU1YHL006C ELP2P42935 788 aa12.8□□□□□ -0.36
SHU1YHL006C SHY1P53266 389 aa12.8□□□□□ -0.36
SHU1YHL006C LSC1P53598 329 aaKnown RBP12.8□□□□□ -0.36
SHU1YHL006C YMR155WQ03795 547 aa12.8□□□□□ -0.36
SHU1YHL006C ROY1Q04847 553 aa12.8□□□□□ -0.36
SHU1YHL006C RAD34Q06665 692 aa12.8□□□□□ -0.36
SHU1YHL006C GUK1P15454 187 aaKnown RBP12.79□□□□□ -0.36
SHU1YHL006C REV7P38927 245 aa12.79□□□□□ -0.36
SHU1YHL006C IBA57P47158 497 aa12.79□□□□□ -0.36
SHU1YHL006C PRP31P49704 494 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms