RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	UTP25	P40498	721 aa	Known RBP	4.88	□□□□□ -1.63
APL6	YGR261C	BST1	P43571	1029 aa		4.88	□□□□□ -1.63
APL6	YGR261C	TOS3	P43637	560 aa		4.88	□□□□□ -1.63
APL6	YGR261C	BSC6	Q08280	497 aa		4.88	□□□□□ -1.63
APL6	YGR261C	SYN8	P31377	255 aa		4.88	□□□□□ -1.63
APL6	YGR261C	GCG1	P32656	232 aa	Known RBP	4.88	□□□□□ -1.63
APL6	YGR261C	SHM1	P37292	490 aa	Predicted RBP	4.88	□□□□□ -1.63
APL6	YGR261C	YAP3	P38749	330 aa		4.88	□□□□□ -1.63
APL6	YGR261C	ATM1	P40416	690 aa		4.88	□□□□□ -1.63
APL6	YGR261C	TED1	P40533	473 aa		4.88	□□□□□ -1.63
APL6	YGR261C	OYE3	P41816	400 aa	Predicted RBP	4.88	□□□□□ -1.63
APL6	YGR261C	YGR042W	P53227	271 aa		4.88	□□□□□ -1.63
APL6	YGR261C	NUP116	Q02630	1113 aa		4.88	□□□□□ -1.63
APL6	YGR261C	USA1	Q03714	838 aa		4.88	□□□□□ -1.63
APL6	YGR261C	RSM24	Q03976	319 aa		4.88	□□□□□ -1.63
APL6	YGR261C	DPL1	Q05567	589 aa		4.88	□□□□□ -1.63
APL6	YGR261C	TRE1	Q08919	783 aa		4.88	□□□□□ -1.63
APL6	YGR261C	COX17	Q12287	69 aa		4.88	□□□□□ -1.63
APL6	YGR261C	HIS3	P06633	220 aa		4.87	□□□□□ -1.63
APL6	YGR261C	FRS1	P15624	595 aa	Known RBP	4.87	□□□□□ -1.63
APL6	YGR261C	ZRC1	P20107	442 aa		4.87	□□□□□ -1.63
APL6	YGR261C	VPS34	P22543	875 aa		4.87	□□□□□ -1.63
APL6	YGR261C	RIT1	P23796	513 aa		4.87	□□□□□ -1.63
APL6	YGR261C	RPS7A	P26786	190 aa	Known RBP	4.87	□□□□□ -1.63
APL6	YGR261C	IMP3	P32899	183 aa	Predicted RBP	4.87	□□□□□ -1.63
APL6	YGR261C	SET5	P38890	526 aa	Known RBP	4.87	□□□□□ -1.63
APL6	YGR261C	SER3	P40054	469 aa		4.87	□□□□□ -1.63
APL6	YGR261C	RRT14	P40470	206 aa		4.87	□□□□□ -1.63
APL6	YGR261C	VID28	P40547	921 aa		4.87	□□□□□ -1.63
APL6	YGR261C	YIL001W	P40560	513 aa		4.87	□□□□□ -1.63
APL6	YGR261C	NMD5	P46970	1048 aa		4.87	□□□□□ -1.63
APL6	YGR261C	YGR066C	P53242	292 aa		4.87	□□□□□ -1.63
APL6	YGR261C	CTF19	Q02732	369 aa		4.87	□□□□□ -1.63
APL6	YGR261C	THI22	Q06490	572 aa		4.87	□□□□□ -1.63
APL6	YGR261C	YEH1	Q07804	573 aa		4.87	□□□□□ -1.63
APL6	YGR261C	ENV7	Q12003	364 aa		4.87	□□□□□ -1.63
APL6	YGR261C	YDR262W	Q12331	272 aa		4.87	□□□□□ -1.63
APL6	YGR261C	NDJ1	Q12366	352 aa		4.87	□□□□□ -1.63
APL6	YGR261C	PTC5	Q12511	572 aa		4.87	□□□□□ -1.63
APL6	YGR261C	SSN2	P38931	1420 aa		4.87	□□□□□ -1.63
APL6	YGR261C	GPH1	P06738	902 aa	Known RBP	4.87	□□□□□ -1.63
APL6	YGR261C	COQ1	P18900	473 aa		4.87	□□□□□ -1.63
APL6	YGR261C	RAD14	P28519	371 aa		4.87	□□□□□ -1.63
APL6	YGR261C	REC104	P33323	182 aa		4.87	□□□□□ -1.63
APL6	YGR261C	APT2	P36973	181 aa		4.87	□□□□□ -1.63
APL6	YGR261C	URA8	P38627	578 aa	Predicted RBP	4.87	□□□□□ -1.63
APL6	YGR261C	YHI9	P38765	294 aa		4.87	□□□□□ -1.63
APL6	YGR261C	RPA34	P47006	233 aa	Predicted RBP	4.87	□□□□□ -1.63
APL6	YGR261C	FMS1	P50264	508 aa		4.87	□□□□□ -1.63
APL6	YGR261C	RIB4	P50861	169 aa	Predicted RBP	4.87	□□□□□ -1.63
APL6	YGR261C	PEX12	Q04370	399 aa		4.87	□□□□□ -1.63
APL6	YGR261C	DUS3	Q06053	668 aa	Known RBP	4.87	□□□□□ -1.63
APL6	YGR261C	PIG1	Q06216	648 aa		4.87	□□□□□ -1.63
APL6	YGR261C	CDD1	Q06549	142 aa		4.87	□□□□□ -1.63
APL6	YGR261C	SYT1	Q06836	1226 aa		4.87	□□□□□ -1.63
APL6	YGR261C	NRT1	Q08485	598 aa		4.87	□□□□□ -1.63
APL6	YGR261C	RPN8	Q08723	338 aa	Known RBP	4.87	□□□□□ -1.63
APL6	YGR261C	MUM3	Q08750	479 aa		4.87	□□□□□ -1.63
APL6	YGR261C	TPK2	P06245	380 aa		4.86	□□□□□ -1.63
APL6	YGR261C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
APL6	YGR261C	RNR2	P09938	399 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	YEL076C-A	P0CX16	216 aa		4.86	□□□□□ -1.63
APL6	YGR261C	YLR464W	P0CX17	216 aa		4.86	□□□□□ -1.63
APL6	YGR261C	RBK1	P25332	333 aa		4.86	□□□□□ -1.63
APL6	YGR261C	SRP102	P36057	244 aa	Predicted RBP	4.86	□□□□□ -1.63
APL6	YGR261C	FIG1	P38224	298 aa		4.86	□□□□□ -1.63
APL6	YGR261C	SLM4	P38247	162 aa		4.86	□□□□□ -1.63
APL6	YGR261C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
APL6	YGR261C	PAC1	P39946	494 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	YEL076C	P39971	216 aa		4.86	□□□□□ -1.63
APL6	YGR261C	IRC24	P40580	263 aa		4.86	□□□□□ -1.63
APL6	YGR261C	IRC7	P43623	340 aa		4.86	□□□□□ -1.63
APL6	YGR261C	EMI2	Q04409	500 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	DYN3	Q04949	312 aa		4.86	□□□□□ -1.63
APL6	YGR261C	HRQ1	Q05549	1077 aa		4.86	□□□□□ -1.63
APL6	YGR261C	SPO77	Q06134	477 aa		4.86	□□□□□ -1.63
APL6	YGR261C	YFH1	Q07540	174 aa		4.86	□□□□□ -1.63
APL6	YGR261C	NOP12	Q08208	459 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	YLR302C	O13544	120 aa		4.86	□□□□□ -1.63
APL6	YGR261C	MATALPHA1	P0CY06	175 aa		4.86	□□□□□ -1.63
APL6	YGR261C	HMLALPHA1	P0CY07	175 aa		4.86	□□□□□ -1.63
APL6	YGR261C	POL30	P15873	258 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	SNF6	P18888	332 aa		4.86	□□□□□ -1.63
APL6	YGR261C	DAL2	P25335	343 aa		4.86	□□□□□ -1.63
APL6	YGR261C	RPS5	P26783	225 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	CWP1	P28319	239 aa		4.86	□□□□□ -1.63
APL6	YGR261C	DGR2	P32330	852 aa		4.86	□□□□□ -1.63
APL6	YGR261C	RPD3	P32561	433 aa		4.86	□□□□□ -1.63
APL6	YGR261C	OLA1	P38219	394 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	PFF1	P38244	976 aa		4.86	□□□□□ -1.63
APL6	YGR261C	RPN10	P38886	268 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	SSP120	P39931	234 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	YER121W	P40076	114 aa		4.86	□□□□□ -1.63
APL6	YGR261C	YER158C	P40095	573 aa		4.86	□□□□□ -1.63
APL6	YGR261C	JLP2	P40206	208 aa		4.86	□□□□□ -1.63
APL6	YGR261C	ALY2	P47029	1046 aa		4.86	□□□□□ -1.63
APL6	YGR261C	YGL159W	P53110	370 aa		4.86	□□□□□ -1.63
APL6	YGR261C	DBP6	P53734	629 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	NGL2	Q03264	515 aa	Known RBP	4.86	□□□□□ -1.63
APL6	YGR261C	AIM33	Q04516	312 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 186.2 ms