RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	NUP133	P36161	1157 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	RPL32	P38061	130 aa	Known RBP	3.1	□□□□□ -1.91
VMA21	YGR105W	RPH1	P39956	796 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	RPR2	P40571	144 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	SNG1	P46950	547 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	RTT101	P47050	842 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	YML037C	Q03703	340 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	LUC7	Q07508	261 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA21	YGR105W	SPE4	Q12455	300 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	SET6	Q12529	373 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	APE1	P14904	514 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	MTF1	P14908	341 aa	Known RBP	3.09	□□□□□ -1.91
VMA21	YGR105W	YCK1	P23291	538 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	UBP11	P36026	717 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	YBR139W	P38109	508 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	OSH3	P38713	996 aa	Known RBP	3.09	□□□□□ -1.91
VMA21	YGR105W	YEL068C	P39977	110 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	YJL213W	P40896	331 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	FAR3	P46671	204 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	YDL186W	P48568	277 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	DSD1	P53095	428 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	YGR127W	P53275	312 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	SHR3	Q02774	210 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	RLI1	Q03195	608 aa	Known RBP	3.09	□□□□□ -1.91
VMA21	YGR105W	BUD22	Q04347	519 aa	Known RBP	3.09	□□□□□ -1.91
VMA21	YGR105W	YMR018W	Q04364	514 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	YDL057W	Q07379	328 aa		3.09	□□□□□ -1.91
VMA21	YGR105W	ETT1	Q08421	412 aa	Known RBP	3.09	□□□□□ -1.91
VMA21	YGR105W	MF(ALPHA)1	P01149	165 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	PEP5	P12868	1029 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	MCK1	P21965	375 aa	Known RBP	3.08	□□□□□ -1.92
VMA21	YGR105W	SGF29	P25554	259 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	YIH1	P25637	258 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	CHS3	P29465	1165 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	SPC110	P32380	944 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	SSE2	P32590	693 aa	Known RBP	3.08	□□□□□ -1.92
VMA21	YGR105W	YBR144C	P34215	104 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	MTC4	P38335	694 aa	Known RBP	3.08	□□□□□ -1.92
VMA21	YGR105W	AFG3	P39925	761 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	CSM2	P40465	213 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	COS10	P52924	374 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	ERP1	Q05359	219 aa	Known RBP	3.08	□□□□□ -1.92
VMA21	YGR105W	SDH5	Q08230	162 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	NCE102	Q12207	173 aa	RIP-Chip data	3.08	□□□□□ -1.92	not detected
VMA21	YGR105W	AYT1	Q12226	474 aa		3.08	□□□□□ -1.92
VMA21	YGR105W	YCR022C	P25620	114 aa		3.07	□□□□□ -1.92
VMA21	YGR105W	MCM10	P32354	571 aa		3.07	□□□□□ -1.92
VMA21	YGR105W	MUD2	P36084	527 aa	Known RBP	3.07	□□□□□ -1.92
VMA21	YGR105W	YKL023W	P36103	277 aa	Known RBP	3.07	□□□□□ -1.92
VMA21	YGR105W	YBL029W	P38201	376 aa		3.07	□□□□□ -1.92
VMA21	YGR105W	APT1	P49435	187 aa	Known RBP	3.07	□□□□□ -1.92
VMA21	YGR105W	DRN1	P53255	507 aa	Known RBP	3.07	□□□□□ -1.92
VMA21	YGR105W	YGR126W	P53274	230 aa		3.07	□□□□□ -1.92
VMA21	YGR105W	YKU80	Q04437	629 aa		3.07	□□□□□ -1.92
VMA21	YGR105W	SYO1	Q07395	620 aa		3.07	□□□□□ -1.92
VMA21	YGR105W	RSA1	Q08932	381 aa		3.07	□□□□□ -1.92
VMA21	YGR105W	YBR126W-A	Q8TGU7	68 aa		3.07	□□□□□ -1.92
VMA21	YGR105W	CDC16	P09798	840 aa		3.06	□□□□□ -1.92
VMA21	YGR105W	MRP13	P12686	339 aa		3.06	□□□□□ -1.92
VMA21	YGR105W	SSH4	P32343	579 aa		3.06	□□□□□ -1.92
VMA21	YGR105W	SDS24	P38314	527 aa		3.06	□□□□□ -1.92
VMA21	YGR105W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
VMA21	YGR105W	DUO1	P53168	247 aa	Known RBP	3.06	□□□□□ -1.92
VMA21	YGR105W	NGL3	Q03210	505 aa		3.06	□□□□□ -1.92
VMA21	YGR105W	OPY2	Q06810	360 aa		3.06	□□□□□ -1.92
VMA21	YGR105W	TLG2	Q08144	397 aa		3.06	□□□□□ -1.92
VMA21	YGR105W	SGS1	P35187	1447 aa		3.05	□□□□□ -1.92
VMA21	YGR105W	CAR1	P00812	333 aa	Known RBP	3.05	□□□□□ -1.92
VMA21	YGR105W	HEM2	P05373	342 aa		3.05	□□□□□ -1.92
VMA21	YGR105W	RPL20A	P0CX23	172 aa	Known RBP	3.05	□□□□□ -1.92
VMA21	YGR105W	RPL20B	P0CX24	172 aa	Predicted RBP	3.05	□□□□□ -1.92
VMA21	YGR105W	AMD1	P15274	810 aa	Known RBP	3.05	□□□□□ -1.92
VMA21	YGR105W	FRE1	P32791	686 aa		3.05	□□□□□ -1.92
VMA21	YGR105W	TIF3	P34167	436 aa	Known RBP	3.05	□□□□□ -1.92
VMA21	YGR105W	AVT5	P38176	459 aa		3.05	□□□□□ -1.92
VMA21	YGR105W	ALT2	P52892	507 aa		3.05	□□□□□ -1.92
VMA21	YGR105W	BOR1	P53838	576 aa		3.05	□□□□□ -1.92
VMA21	YGR105W	SLD5	Q03406	294 aa		3.05	□□□□□ -1.92
VMA21	YGR105W	FMP40	Q08968	688 aa	Predicted RBP	3.05	□□□□□ -1.92
VMA21	YGR105W	YDL009C	Q12210	107 aa		3.05	□□□□□ -1.92
VMA21	YGR105W	RAD52	P06778	471 aa	Known RBP	3.04	□□□□□ -1.92
VMA21	YGR105W	PEP4	P07267	405 aa	Known RBP	3.04	□□□□□ -1.92
VMA21	YGR105W	CBS2	P14905	389 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	NOP1	P15646	327 aa	Known RBP	3.04	□□□□□ -1.92
VMA21	YGR105W	EST1	P17214	699 aa	Predicted RBP	3.04	□□□□□ -1.92
VMA21	YGR105W	ART10	P18634	518 aa	Known RBP	3.04	□□□□□ -1.92
VMA21	YGR105W	SAN1	P22470	610 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	PCA1	P38360	1216 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	YHR210C	P38893	341 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	CIN4	P39110	191 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	NPR2	P39923	615 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	YJR154W	P47181	346 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	IPI3	P53877	555 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	RPC11	Q04307	110 aa	Predicted RBP	3.04	□□□□□ -1.92
VMA21	YGR105W	BNA5	Q05979	453 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	YOR365C	Q08844	703 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	HUA2	Q12134	243 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	YLL056C	Q12177	298 aa		3.04	□□□□□ -1.92
VMA21	YGR105W	SUI2	P20459	304 aa	Known RBP	3.03	□□□□□ -1.92
VMA21	YGR105W	DPB3	P27344	201 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms