RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	CFD1	P40558	293 aa		3.31	□□□□□ -1.88
YGR039W	YGR039W	FET5	P43561	622 aa		3.31	□□□□□ -1.88
YGR039W	YGR039W	CWC22	P53333	577 aa	Known RBP	3.31	□□□□□ -1.88
YGR039W	YGR039W	TOF1	P53840	1238 aa		3.31	□□□□□ -1.88
YGR039W	YGR039W	UBP16	Q02863	499 aa		3.31	□□□□□ -1.88
YGR039W	YGR039W	KAP120	Q02932	1032 aa		3.31	□□□□□ -1.88
YGR039W	YGR039W	FIN1	Q03898	291 aa		3.31	□□□□□ -1.88
YGR039W	YGR039W	CYK3	Q07533	885 aa		3.31	□□□□□ -1.88
YGR039W	YGR039W	BI2	P03873	423 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	YER190C-B	P0CX94	160 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	YEL077W-A	P0CX95	160 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	YGR296C-B	P0CX96	160 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	YPL283W-B	P0CX97	160 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	YPR204C-A	P0CX98	160 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	GLK1	P17709	500 aa	Known RBP	3.3	□□□□□ -1.88
YGR039W	YGR039W	ELO2	P25358	347 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	PUP3	P25451	205 aa	Known RBP	3.3	□□□□□ -1.88
YGR039W	YGR039W	LAC1	P28496	418 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	SSE2	P32590	693 aa	Known RBP	3.3	□□□□□ -1.88
YGR039W	YGR039W	RML2	P32611	393 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	TFB1	P32776	642 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	LTV1	P34078	463 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	SNU114	P36048	1008 aa	Known RBP	3.3	□□□□□ -1.88
YGR039W	YGR039W	YHR054C	P38780	354 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	UIP3	P39547	235 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	OCA1	P50946	238 aa	Predicted RBP	3.3	□□□□□ -1.88
YGR039W	YGR039W	DIA3	P52290	468 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	DCP2	P53550	970 aa	Known RBP	3.3	□□□□□ -1.88
YGR039W	YGR039W	LSC1	P53598	329 aa	Known RBP	3.3	□□□□□ -1.88
YGR039W	YGR039W	NCS2	P53923	493 aa	Predicted RBP	3.3	□□□□□ -1.88
YGR039W	YGR039W	RSM28	Q03430	361 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	NUP53	Q03790	475 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	TAP42	Q04372	366 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	YDR109C	Q04585	715 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	VTA1	Q06263	330 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	UAF30	Q08747	228 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	PSY3	Q12318	242 aa		3.3	□□□□□ -1.88
YGR039W	YGR039W	RPL1A	P0CX43	217 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	RPL1B	P0CX44	217 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	RPL3	P14126	387 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	KRS1	P15180	591 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	PDA1	P16387	420 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	CLC1	P17891	233 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	DAP2	P18962	818 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	RRP43	P25359	394 aa	Predicted RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	ADH7	P25377	361 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	IDH2	P28241	369 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	SMI1	P32566	505 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	SIP1	P32578	815 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	YEL043W	P32618	956 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	YME2	P32843	850 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	RPF2	P36160	344 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	PIM1	P36775	1133 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	AFG3	P39925	761 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	ECM10	P39987	644 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	BUR6	P40096	142 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	ALG5	P40350	334 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	IRC7	P43623	340 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	FMS1	P50264	508 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	YGR111W	P53265	400 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	COP1	P53622	1201 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	YNL058C	P53947	316 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	PRO2	P54885	456 aa	Known RBP	3.29	□□□□□ -1.88
YGR039W	YGR039W	MRPL1	Q04599	285 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	YML053C	Q04978	212 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	YOL159C	Q08300	171 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	INP53	Q12271	1107 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	HER1	Q12276	1246 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	CTF3	Q12748	733 aa		3.29	□□□□□ -1.88
YGR039W	YGR039W	YML133C	Q03099	1374 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	YLL067C	Q07888	1374 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	YLL066C	Q99208	1374 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	STF1	P01098	86 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	HXK2	P04807	486 aa	Known RBP	3.28	□□□□□ -1.88
YGR039W	YGR039W	SPB1	P25582	841 aa	Predicted RBP	3.28	□□□□□ -1.88
YGR039W	YGR039W	GYP6	P32806	458 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	YBR144C	P34215	104 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	TUL1	P36096	758 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	NUP133	P36161	1157 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	DAD2	P36162	133 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	SLM4	P38247	162 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	YSW1	P38280	609 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	VBA2	P38358	474 aa	Known RBP	3.28	□□□□□ -1.88
YGR039W	YGR039W	SAP1	P39955	897 aa	Known RBP	3.28	□□□□□ -1.88
YGR039W	YGR039W	PKP1	P40530	394 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	YFR020W	P43600	232 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	DPB11	P47027	764 aa	Predicted RBP	3.28	□□□□□ -1.88
YGR039W	YGR039W	SMC3	P47037	1230 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	UBX6	P47049	396 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	IST1	P53843	298 aa	Predicted RBP	3.28	□□□□□ -1.88
YGR039W	YGR039W	IPI3	P53877	555 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	MSC1	Q03104	513 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	RAD33	Q04231	177 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	DON1	Q05610	365 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	DBP9	Q06218	594 aa	Known RBP	3.28	□□□□□ -1.88
YGR039W	YGR039W	LEU9	Q12166	604 aa	Known RBP	3.28	□□□□□ -1.88
YGR039W	YGR039W	YDL007C-A	Q2V2Q0	85 aa		3.28	□□□□□ -1.88
YGR039W	YGR039W	YPT1	P01123	206 aa	Known RBP	3.27	□□□□□ -1.89
YGR039W	YGR039W	HIP1	P06775	603 aa		3.27	□□□□□ -1.89
YGR039W	YGR039W	PET111	P08468	800 aa		3.27	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms