RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W MHF1Q3E835 90 aa11.26□□□□□ -0.61
RTF1YGL244W RPS9AO13516 197 aaKnown RBP11.25□□□□□ -0.61
RTF1YGL244W YCR099CP25657 155 aa11.25□□□□□ -0.61
RTF1YGL244W MAK5P38112 773 aaPredicted RBP11.25□□□□□ -0.61
RTF1YGL244W YAP1801P38856 637 aa11.25□□□□□ -0.61
RTF1YGL244W MTW1P39731 289 aa11.25□□□□□ -0.61
RTF1YGL244W YEL023CP39992 682 aa11.25□□□□□ -0.61
RTF1YGL244W UTP18P40362 594 aaPredicted RBP11.25□□□□□ -0.61
RTF1YGL244W ESL1P40456 1118 aa11.25□□□□□ -0.61
RTF1YGL244W FKH2P41813 862 aa11.25□□□□□ -0.61
RTF1YGL244W EFM6P53970 246 aa11.25□□□□□ -0.61
RTF1YGL244W YNL018CP53976 612 aa11.25□□□□□ -0.61
RTF1YGL244W RSC4Q02206 625 aa11.25□□□□□ -0.61
RTF1YGL244W NUP100Q02629 959 aa11.25□□□□□ -0.61
RTF1YGL244W PGC1Q08959 321 aa11.25□□□□□ -0.61
RTF1YGL244W THP3Q12049 470 aaKnown RBP11.25□□□□□ -0.61
RTF1YGL244W MRH1Q12117 320 aaPredicted RBP11.25□□□□□ -0.61
RTF1YGL244W JLP1Q12358 412 aa11.25□□□□□ -0.61
RTF1YGL244W YKL018C-AQ3E7A7 99 aa11.25□□□□□ -0.61
RTF1YGL244W RPL6BP05739 176 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W NFT1P0CE68 1218 aa11.24□□□□□ -0.61
RTF1YGL244W PRP19P32523 503 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W CDC5P32562 705 aa11.24□□□□□ -0.61
RTF1YGL244W TKL2P33315 681 aa11.24□□□□□ -0.61
RTF1YGL244W YHR078WP38799 552 aa11.24□□□□□ -0.61
RTF1YGL244W FAR7P43592 221 aa11.24□□□□□ -0.61
RTF1YGL244W DLD2P46681 530 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W ATP22P50273 684 aaPredicted RBP11.24□□□□□ -0.61
RTF1YGL244W RAI1P53063 387 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W YNL134CP53912 376 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W MUK1Q02866 612 aa11.24□□□□□ -0.61
RTF1YGL244W MUS81Q04149 632 aaPredicted RBP11.24□□□□□ -0.61
RTF1YGL244W COA4Q05809 96 aa11.24□□□□□ -0.61
RTF1YGL244W NGL1Q08213 363 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W MNL2Q12205 849 aa11.24□□□□□ -0.61
RTF1YGL244W TRM10Q12400 293 aa11.24□□□□□ -0.61
RTF1YGL244W DCP1Q12517 231 aaPredicted RBP11.24□□□□□ -0.61
RTF1YGL244W MHF2Q3E829 80 aa11.24□□□□□ -0.61
RTF1YGL244W GAL80P04387 435 aa11.24□□□□□ -0.61
RTF1YGL244W KGD1P20967 1014 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W RSA4P25382 515 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W MRPL6P32904 214 aa11.24□□□□□ -0.61
RTF1YGL244W STB5P38699 743 aa11.24□□□□□ -0.61
RTF1YGL244W YLF2P38746 405 aa11.24□□□□□ -0.61
RTF1YGL244W SOP4P39543 234 aaPredicted RBP11.24□□□□□ -0.61
RTF1YGL244W RGI1P40043 161 aaPredicted RBP11.24□□□□□ -0.61
RTF1YGL244W OPT1P40897 799 aa11.24□□□□□ -0.61
RTF1YGL244W AIM23P47015 356 aa11.24□□□□□ -0.61
RTF1YGL244W RCO1Q04779 684 aa11.24□□□□□ -0.61
RTF1YGL244W YHC1Q05900 231 aaKnown RBP11.24□□□□□ -0.61
RTF1YGL244W VAM6Q07468 1049 aa11.24□□□□□ -0.61
RTF1YGL244W RIB3Q99258 208 aa11.24□□□□□ -0.61
RTF1YGL244W HTA2P04912 132 aa11.23□□□□□ -0.61
RTF1YGL244W RPS4AP0CX35 261 aaKnown RBP11.23□□□□□ -0.61
RTF1YGL244W RPS4BP0CX36 261 aaKnown RBP11.23□□□□□ -0.61
RTF1YGL244W AMD1P15274 810 aaKnown RBP11.23□□□□□ -0.61
RTF1YGL244W CLN1P20437 546 aa11.23□□□□□ -0.61
RTF1YGL244W PET112P33893 541 aa11.23□□□□□ -0.61
RTF1YGL244W ECM13P38195 257 aa11.23□□□□□ -0.61
RTF1YGL244W ARP1P38696 384 aa11.23□□□□□ -0.61
RTF1YGL244W IPT1P38954 527 aa11.23□□□□□ -0.61
RTF1YGL244W GDH3P39708 457 aa11.23□□□□□ -0.61
RTF1YGL244W PTR3P43606 678 aa11.23□□□□□ -0.61
RTF1YGL244W MSE1P48525 536 aa11.23□□□□□ -0.61
RTF1YGL244W MRX10Q05648 414 aa11.23□□□□□ -0.61
RTF1YGL244W ARR1Q06596 294 aa11.23□□□□□ -0.61
RTF1YGL244W PMT7Q06644 662 aa11.23□□□□□ -0.61
RTF1YGL244W LDB18Q07887 179 aa11.23□□□□□ -0.61
RTF1YGL244W TIM9O74700 87 aa11.22□□□□□ -0.61
RTF1YGL244W GPT2P36148 743 aa11.22□□□□□ -0.61
RTF1YGL244W UBX7P38349 436 aa11.22□□□□□ -0.61
RTF1YGL244W YHL041WP38730 149 aa11.22□□□□□ -0.61
RTF1YGL244W EFM1P38732 585 aa11.22□□□□□ -0.61
RTF1YGL244W DLD3P39976 496 aaKnown RBP11.22□□□□□ -0.61
RTF1YGL244W REF2P42073 533 aaPredicted RBP11.22□□□□□ -0.61
RTF1YGL244W NUP85P46673 744 aa11.22□□□□□ -0.61
RTF1YGL244W CWC23P52868 283 aaPredicted RBP11.22□□□□□ -0.61
RTF1YGL244W SPC98P53540 846 aa11.22□□□□□ -0.61
RTF1YGL244W FAP1P53971 965 aa11.22□□□□□ -0.61
RTF1YGL244W YMR111CQ04461 462 aaPredicted RBP11.22□□□□□ -0.61
RTF1YGL244W MRN1Q08925 612 aaKnown RBP RIP-Chip data11.22□□□□□ -0.61not detected
RTF1YGL244W YOR022CQ12204 715 aa11.22□□□□□ -0.61
RTF1YGL244W RPN6Q12377 434 aa11.22□□□□□ -0.61
RTF1YGL244W ENA1P13587 1091 aa11.21□□□□□ -0.61
RTF1YGL244W GUK1P15454 187 aaKnown RBP11.21□□□□□ -0.61
RTF1YGL244W RPS1AP33442 255 aaKnown RBP11.21□□□□□ -0.61
RTF1YGL244W SRP72P38688 640 aaKnown RBP11.21□□□□□ -0.61
RTF1YGL244W YAR028WP39548 234 aa11.21□□□□□ -0.61
RTF1YGL244W FCY21P40039 528 aa11.21□□□□□ -0.61
RTF1YGL244W AYR1P40471 297 aa11.21□□□□□ -0.61
RTF1YGL244W GTO1P48239 356 aa11.21□□□□□ -0.61
RTF1YGL244W STR3P53101 465 aaKnown RBP11.21□□□□□ -0.61
RTF1YGL244W ENA2Q01896 1091 aa11.21□□□□□ -0.61
RTF1YGL244W FMP30Q02883 468 aa11.21□□□□□ -0.61
RTF1YGL244W NFI1Q12216 726 aa11.21□□□□□ -0.61
RTF1YGL244W BBP1Q12365 385 aa11.21□□□□□ -0.61
RTF1YGL244W ICT1Q12385 394 aa11.21□□□□□ -0.61
RTF1YGL244W ENA5Q12691 1091 aa11.21□□□□□ -0.61
RTF1YGL244W PBS2P08018 668 aa11.2□□□□□ -0.62
RTF1YGL244W PHO3P24031 467 aa11.2□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms