RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C APD1P38281 316 aa2.3□□□□□ -2.04
PRE4YFR050C YBR225WP38321 900 aa2.3□□□□□ -2.04
PRE4YFR050C LNP1P38878 278 aa2.3□□□□□ -2.04
PRE4YFR050C SSB2P40150 613 aaKnown RBP2.3□□□□□ -2.04
PRE4YFR050C SNM1P40993 198 aa2.3□□□□□ -2.04
PRE4YFR050C CTF18P49956 741 aa2.3□□□□□ -2.04
PRE4YFR050C DUG3P53871 357 aa2.3□□□□□ -2.04
PRE4YFR050C COG6P53959 839 aa2.3□□□□□ -2.04
PRE4YFR050C USA1Q03714 838 aa2.3□□□□□ -2.04
PRE4YFR050C RPC11Q04307 110 aaPredicted RBP2.3□□□□□ -2.04
PRE4YFR050C PRM6Q04705 352 aa2.3□□□□□ -2.04
PRE4YFR050C SMC5Q08204 1093 aa2.3□□□□□ -2.04
PRE4YFR050C CRT10Q08226 957 aa2.3□□□□□ -2.04
PRE4YFR050C AHA1Q12449 350 aaKnown RBP2.3□□□□□ -2.04
PRE4YFR050C RVB2Q12464 471 aaKnown RBP2.3□□□□□ -2.04
PRE4YFR050C BI2P03873 423 aa2.29□□□□□ -2.04
PRE4YFR050C TPK1P06244 397 aa2.29□□□□□ -2.04
PRE4YFR050C YPK1P12688 680 aaKnown RBP2.29□□□□□ -2.04
PRE4YFR050C URA4P20051 364 aa2.29□□□□□ -2.04
PRE4YFR050C DBF2P22204 572 aa2.29□□□□□ -2.04
PRE4YFR050C ARG1P22768 420 aa2.29□□□□□ -2.04
PRE4YFR050C PPH21P23594 369 aa2.29□□□□□ -2.04
PRE4YFR050C VPS3P23643 1011 aa2.29□□□□□ -2.04
PRE4YFR050C PRD1P25375 712 aa2.29□□□□□ -2.04
PRE4YFR050C PWP2P25635 923 aaKnown RBP2.29□□□□□ -2.04
PRE4YFR050C NAM9P27929 486 aa2.29□□□□□ -2.04
PRE4YFR050C NRP1P32770 719 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
PRE4YFR050C STT3P39007 718 aaKnown RBP2.29□□□□□ -2.04
PRE4YFR050C YMR124WP39523 943 aaKnown RBP2.29□□□□□ -2.04
PRE4YFR050C SAW1P39735 261 aa2.29□□□□□ -2.04
PRE4YFR050C SSP120P39931 234 aaKnown RBP2.29□□□□□ -2.04
PRE4YFR050C AVT2P39981 480 aa2.29□□□□□ -2.04
PRE4YFR050C YIL092WP40497 633 aa2.29□□□□□ -2.04
PRE4YFR050C GPD2P41911 440 aaKnown RBP2.29□□□□□ -2.04
PRE4YFR050C YFL015CP43578 164 aa2.29□□□□□ -2.04
PRE4YFR050C PMT4P46971 762 aa2.29□□□□□ -2.04
PRE4YFR050C GLO1P50107 326 aa2.29□□□□□ -2.04
PRE4YFR050C AAT1Q01802 451 aa2.29□□□□□ -2.04
PRE4YFR050C YDR341CQ05506 607 aaKnown RBP2.29□□□□□ -2.04
PRE4YFR050C RAX1Q08760 435 aa2.29□□□□□ -2.04
PRE4YFR050C NEW1Q08972 1196 aaKnown RBP2.29□□□□□ -2.04
PRE4YFR050C NUR1Q12066 484 aa2.29□□□□□ -2.04
PRE4YFR050C YOR342CQ12182 319 aa2.29□□□□□ -2.04
PRE4YFR050C URA3P03962 267 aa2.28□□□□□ -2.04
PRE4YFR050C AAC1P04710 309 aa2.28□□□□□ -2.04
PRE4YFR050C AQY1P0CD91 305 aa2.28□□□□□ -2.04
PRE4YFR050C RPS8AP0CX39 200 aaKnown RBP2.28□□□□□ -2.04
PRE4YFR050C RPS8BP0CX40 200 aaKnown RBP2.28□□□□□ -2.04
PRE4YFR050C SPS100P13130 326 aa2.28□□□□□ -2.04
PRE4YFR050C ARF2P19146 181 aaKnown RBP2.28□□□□□ -2.04
PRE4YFR050C PHO3P24031 467 aa2.28□□□□□ -2.04
PRE4YFR050C MRC1P25588 1096 aa2.28□□□□□ -2.04
PRE4YFR050C DPH2P32461 534 aa2.28□□□□□ -2.04
PRE4YFR050C YKL102CP34249 101 aa2.28□□□□□ -2.04
PRE4YFR050C MYO3P36006 1272 aa2.28□□□□□ -2.04
PRE4YFR050C VID24P38263 362 aa2.28□□□□□ -2.04
PRE4YFR050C SDH8P38345 138 aa2.28□□□□□ -2.04
PRE4YFR050C MTG2P38860 518 aa2.28□□□□□ -2.04
PRE4YFR050C IDS2P46958 469 aa2.28□□□□□ -2.04
PRE4YFR050C BSC5P53755 489 aa2.28□□□□□ -2.04
PRE4YFR050C YNR071CP53757 342 aa2.28□□□□□ -2.04
PRE4YFR050C RPT6Q01939 405 aaKnown RBP2.28□□□□□ -2.04
PRE4YFR050C GAS3Q03655 524 aa2.28□□□□□ -2.04
PRE4YFR050C RNH1Q04740 348 aa2.28□□□□□ -2.04
PRE4YFR050C ECM22Q05958 814 aaPredicted RBP2.28□□□□□ -2.04
PRE4YFR050C CDD1Q06549 142 aa2.28□□□□□ -2.04
PRE4YFR050C YAP7Q08182 245 aa2.28□□□□□ -2.04
PRE4YFR050C CYR1P08678 2026 aaKnown RBP2.28□□□□□ -2.04
PRE4YFR050C SUC2P00724 532 aa2.27□□□□□ -2.05
PRE4YFR050C PHO2P07269 559 aa2.27□□□□□ -2.05
PRE4YFR050C CDC16P09798 840 aa2.27□□□□□ -2.05
PRE4YFR050C CBP3P21560 335 aa2.27□□□□□ -2.05
PRE4YFR050C URE2P23202 354 aaKnown RBP2.27□□□□□ -2.05
PRE4YFR050C CDC5P32562 705 aa2.27□□□□□ -2.05
PRE4YFR050C BEM3P32873 1128 aa2.27□□□□□ -2.05
PRE4YFR050C SDS22P36047 338 aa2.27□□□□□ -2.05
PRE4YFR050C KTR3P38130 404 aaPredicted RBP2.27□□□□□ -2.05
PRE4YFR050C RRP8P38961 392 aaKnown RBP2.27□□□□□ -2.05
PRE4YFR050C EXO1P39875 702 aa2.27□□□□□ -2.05
PRE4YFR050C VFA1P40080 203 aa2.27□□□□□ -2.05
PRE4YFR050C ULP2P40537 1034 aaPredicted RBP2.27□□□□□ -2.05
PRE4YFR050C PSA1P41940 361 aaKnown RBP2.27□□□□□ -2.05
PRE4YFR050C SNO3P43544 222 aa2.27□□□□□ -2.05
PRE4YFR050C ASK10P48361 1146 aa2.27□□□□□ -2.05
PRE4YFR050C ASE1P50275 885 aa2.27□□□□□ -2.05
PRE4YFR050C DUO1P53168 247 aaKnown RBP2.27□□□□□ -2.05
PRE4YFR050C YNL146WP53906 100 aa2.27□□□□□ -2.05
PRE4YFR050C VAC7P53950 1165 aa2.27□□□□□ -2.05
PRE4YFR050C YPL071CQ02864 156 aa2.27□□□□□ -2.05
PRE4YFR050C CWC21Q03375 135 aaKnown RBP2.27□□□□□ -2.05
PRE4YFR050C YET2Q04210 160 aa2.27□□□□□ -2.05
PRE4YFR050C PER33Q12144 273 aa2.27□□□□□ -2.05
PRE4YFR050C RDL1Q12305 139 aaKnown RBP2.27□□□□□ -2.05
PRE4YFR050C DBP10Q12389 995 aaKnown RBP2.27□□□□□ -2.05
PRE4YFR050C PDR18P53756 1333 aa2.26□□□□□ -2.05
PRE4YFR050C RED1P14291 827 aa2.26□□□□□ -2.05
PRE4YFR050C GDA1P32621 518 aa2.26□□□□□ -2.05
PRE4YFR050C DTR1P38125 572 aa2.26□□□□□ -2.05
PRE4YFR050C YPT10P38146 199 aa2.26□□□□□ -2.05
PRE4YFR050C TAE1P38340 232 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 378.4 ms