RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C APE2P32454 952 aaKnown RBP11.78□□□□□ -0.52
SCC4YER147C SWD1P39706 426 aa11.78□□□□□ -0.52
SCC4YER147C SSQ1Q05931 657 aaPredicted RBP11.78□□□□□ -0.52
SCC4YER147C MCM21Q06675 368 aa11.78□□□□□ -0.52
SCC4YER147C HXK2P04807 486 aaKnown RBP11.77□□□□□ -0.53
SCC4YER147C SPT3P06844 337 aa11.77□□□□□ -0.53
SCC4YER147C PEX3P28795 441 aa11.77□□□□□ -0.53
SCC4YER147C RPC82P32349 654 aa11.77□□□□□ -0.53
SCC4YER147C GCS1P35197 352 aa11.77□□□□□ -0.53
SCC4YER147C KTR4P38131 464 aa11.77□□□□□ -0.53
SCC4YER147C RFS1P38234 210 aaKnown RBP11.77□□□□□ -0.53
SCC4YER147C AVT6P40074 448 aa11.77□□□□□ -0.53
SCC4YER147C GTO1P48239 356 aa11.77□□□□□ -0.53
SCC4YER147C RBL2P48606 106 aaKnown RBP11.77□□□□□ -0.53
SCC4YER147C COQ6P53318 479 aa11.77□□□□□ -0.53
SCC4YER147C YKR005CQ02203 525 aa11.77□□□□□ -0.53
SCC4YER147C YDR124WQ04608 324 aa11.77□□□□□ -0.53
SCC4YER147C NDJ1Q12366 352 aa11.77□□□□□ -0.53
SCC4YER147C RPS9AO13516 197 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C RPS4AP0CX35 261 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C RPS4BP0CX36 261 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C MRPL8P22353 238 aa11.76□□□□□ -0.53
SCC4YER147C UBC8P28263 218 aa11.76□□□□□ -0.53
SCC4YER147C SSZ1P38788 538 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C MPT5P39016 859 aaKnown RBP RIP-Chip data11.76□□□□□ -0.53not detected
SCC4YER147C AYR1P40471 297 aa11.76□□□□□ -0.53
SCC4YER147C IRR1P40541 1150 aa11.76□□□□□ -0.53
SCC4YER147C GTS1P40956 396 aa11.76□□□□□ -0.53
SCC4YER147C IRC5P43610 853 aa11.76□□□□□ -0.53
SCC4YER147C NUP85P46673 744 aa11.76□□□□□ -0.53
SCC4YER147C YPT32P51996 222 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C ARE2P53629 642 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C SPR6Q01684 191 aa11.76□□□□□ -0.53
SCC4YER147C CLU1Q03690 1277 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C YHC1Q05900 231 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C YOL159C-AQ3E769 90 aa11.76□□□□□ -0.53
SCC4YER147C PRT1P06103 763 aaKnown RBP11.76□□□□□ -0.53
SCC4YER147C MAS1P10507 462 aa11.76□□□□□ -0.53
SCC4YER147C OCA4P25366 362 aa11.76□□□□□ -0.53
SCC4YER147C UIP5P36137 443 aa11.76□□□□□ -0.53
SCC4YER147C MRPL40P36534 297 aa11.76□□□□□ -0.53
SCC4YER147C CSN12P47130 423 aa11.76□□□□□ -0.53
SCC4YER147C AMA1P50082 593 aa11.76□□□□□ -0.53
SCC4YER147C RPA14P50106 137 aa11.76□□□□□ -0.53
SCC4YER147C YNR068CP53754 272 aa11.76□□□□□ -0.53
SCC4YER147C BNI4P53858 892 aa11.76□□□□□ -0.53
SCC4YER147C TFB3Q03290 321 aa11.76□□□□□ -0.53
SCC4YER147C MRPL32P25348 183 aa11.75□□□□□ -0.53
SCC4YER147C RIB7P33312 244 aa11.75□□□□□ -0.53
SCC4YER147C LRG1P35688 1017 aa11.75□□□□□ -0.53
SCC4YER147C STB6P36085 766 aa11.75□□□□□ -0.53
SCC4YER147C RGI1P40043 161 aaPredicted RBP11.75□□□□□ -0.53
SCC4YER147C RMD8P43620 662 aa11.75□□□□□ -0.53
SCC4YER147C GUS1P46655 708 aaKnown RBP RIP-Chip data11.75□□□□□ -0.53not detected
SCC4YER147C TIS11P47977 285 aa11.75□□□□□ -0.53
SCC4YER147C EFR3Q03653 782 aaKnown RBP11.75□□□□□ -0.53
SCC4YER147C ECM11Q04110 302 aa11.75□□□□□ -0.53
SCC4YER147C MRI1Q06489 411 aaKnown RBP11.75□□□□□ -0.53
SCC4YER147C RAD7P06779 565 aa11.74□□□□□ -0.53
SCC4YER147C THI80P35202 319 aa11.74□□□□□ -0.53
SCC4YER147C TPO5P36029 618 aa11.74□□□□□ -0.53
SCC4YER147C NTR2P36118 322 aaPredicted RBP11.74□□□□□ -0.53
SCC4YER147C MTW1P39731 289 aa11.74□□□□□ -0.53
SCC4YER147C YNL143CP53908 130 aa11.74□□□□□ -0.53
SCC4YER147C ENT2Q05785 613 aa11.74□□□□□ -0.53
SCC4YER147C RPN8Q08723 338 aaKnown RBP11.74□□□□□ -0.53
SCC4YER147C MRN1Q08925 612 aaKnown RBP RIP-Chip data11.74□□□□□ -0.53not detected
SCC4YER147C SST2P11972 698 aaKnown RBP11.74□□□□□ -0.53
SCC4YER147C YAP1P19880 650 aaKnown RBP11.74□□□□□ -0.53
SCC4YER147C VMA6P32366 345 aaKnown RBP11.74□□□□□ -0.53
SCC4YER147C MAE1P36013 669 aaKnown RBP11.74□□□□□ -0.53
SCC4YER147C SIP4P46954 829 aa11.74□□□□□ -0.53
SCC4YER147C RSN1Q03516 953 aa11.74□□□□□ -0.53
SCC4YER147C IOC2Q12072 812 aa11.74□□□□□ -0.53
SCC4YER147C YLL054CQ12244 843 aa11.74□□□□□ -0.53
SCC4YER147C RPN6Q12377 434 aa11.74□□□□□ -0.53
SCC4YER147C PEX11Q12462 236 aa11.74□□□□□ -0.53
SCC4YER147C TPK3P05986 398 aa11.73□□□□□ -0.53
SCC4YER147C MRP13P12686 339 aa11.73□□□□□ -0.53
SCC4YER147C PGS1P25578 521 aa11.73□□□□□ -0.53
SCC4YER147C MRPL9P31334 269 aa11.73□□□□□ -0.53
SCC4YER147C ARP2P32381 391 aaKnown RBP11.73□□□□□ -0.53
SCC4YER147C SFP1P32432 683 aa11.73□□□□□ -0.53
SCC4YER147C CDC5P32562 705 aa11.73□□□□□ -0.53
SCC4YER147C YKL100CP34248 587 aa11.73□□□□□ -0.53
SCC4YER147C ALY1P36117 915 aa11.73□□□□□ -0.53
SCC4YER147C BTT1P40314 149 aaPredicted RBP11.73□□□□□ -0.53
SCC4YER147C MON1P53129 644 aa11.73□□□□□ -0.53
SCC4YER147C YDL114WQ07530 308 aa11.73□□□□□ -0.53
SCC4YER147C YLL032CQ07834 825 aaKnown RBP RIP-Chip data11.73□□□□□ -0.53not detected
SCC4YER147C YOR387CQ08910 206 aa11.73□□□□□ -0.53
SCC4YER147C NTG1P31378 399 aa11.72□□□□□ -0.53
SCC4YER147C SGE1P33335 543 aa11.72□□□□□ -0.53
SCC4YER147C EGD2P38879 174 aaKnown RBP11.72□□□□□ -0.53
SCC4YER147C MEP1P40260 492 aa11.72□□□□□ -0.53
SCC4YER147C IME4P41833 600 aa11.72□□□□□ -0.53
SCC4YER147C VPS62P53285 467 aa11.72□□□□□ -0.53
SCC4YER147C IPI3P53877 555 aa11.72□□□□□ -0.53
SCC4YER147C PEX13P80667 386 aa11.72□□□□□ -0.53
SCC4YER147C YMR010WQ03687 405 aa11.72□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms