RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W NFI1Q12216 726 aa2.54□□□□□ -2
SNX41YDR425W TY2A-BQ12260 438 aa2.54□□□□□ -2
SNX41YDR425W TY2A-OR2Q12293 438 aa2.54□□□□□ -2
SNX41YDR425W TY2A-DR1Q12392 438 aa2.54□□□□□ -2
SNX41YDR425W TY2A-OR1Q12439 438 aa2.54□□□□□ -2
SNX41YDR425W NCB2Q92317 146 aa2.54□□□□□ -2
SNX41YDR425W TY2A-DR3Q99303 438 aa2.54□□□□□ -2
SNX41YDR425W RPA190P10964 1664 aaKnown RBP2.53□□□□□ -2
SNX41YDR425W MATALPHA2P0CY08 210 aa2.53□□□□□ -2
SNX41YDR425W HMLALPHA2P0CY09 210 aa2.53□□□□□ -2
SNX41YDR425W PGI1P12709 554 aaKnown RBP2.53□□□□□ -2
SNX41YDR425W APA1P16550 321 aaKnown RBP2.53□□□□□ -2
SNX41YDR425W CLB2P24869 491 aa2.53□□□□□ -2
SNX41YDR425W SRB5P32585 307 aa2.53□□□□□ -2
SNX41YDR425W RAD5P32849 1169 aaPredicted RBP2.53□□□□□ -2
SNX41YDR425W CNS1P33313 385 aa2.53□□□□□ -2
SNX41YDR425W TFC3P34111 1160 aa2.53□□□□□ -2
SNX41YDR425W ECM4P36156 370 aa2.53□□□□□ -2
SNX41YDR425W MRPL36P36531 177 aa2.53□□□□□ -2
SNX41YDR425W YIL169CP40442 995 aa2.53□□□□□ -2
SNX41YDR425W AIM20P40451 204 aa2.53□□□□□ -2
SNX41YDR425W EFM4P40516 257 aa2.53□□□□□ -2
SNX41YDR425W MAK10Q02197 733 aa2.53□□□□□ -2
SNX41YDR425W IZH1Q03419 316 aa2.53□□□□□ -2
SNX41YDR425W INP2Q03824 705 aa2.53□□□□□ -2
SNX41YDR425W FAR8Q05040 523 aa2.53□□□□□ -2
SNX41YDR425W HCR1Q05775 265 aaKnown RBP2.53□□□□□ -2
SNX41YDR425W CRN1Q06440 651 aa2.53□□□□□ -2
SNX41YDR425W ABP140Q08641 628 aaKnown RBP2.53□□□□□ -2
SNX41YDR425W GPN2Q08726 347 aaPredicted RBP2.53□□□□□ -2
SNX41YDR425W YOR111WQ99210 232 aa2.53□□□□□ -2
SNX41YDR425W CDC8P00572 216 aa2.52□□□□□ -2.01
SNX41YDR425W ARG4P04076 463 aaPredicted RBP2.52□□□□□ -2.01
SNX41YDR425W SPO12P17123 173 aa2.52□□□□□ -2.01
SNX41YDR425W KAR9P32526 644 aa2.52□□□□□ -2.01
SNX41YDR425W SAC6P32599 642 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W RGT1P32862 1170 aa2.52□□□□□ -2.01
SNX41YDR425W XRS2P33301 854 aa2.52□□□□□ -2.01
SNX41YDR425W YET1P35723 206 aa2.52□□□□□ -2.01
SNX41YDR425W LHS1P36016 881 aa2.52□□□□□ -2.01
SNX41YDR425W FZO1P38297 855 aa2.52□□□□□ -2.01
SNX41YDR425W YND1P40009 630 aa2.52□□□□□ -2.01
SNX41YDR425W YRB1P41920 201 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W EPL1P43572 832 aa2.52□□□□□ -2.01
SNX41YDR425W IML2P47031 731 aa2.52□□□□□ -2.01
SNX41YDR425W MLC1P53141 149 aa2.52□□□□□ -2.01
SNX41YDR425W ZPR1P53303 486 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W ESBP6P53918 673 aa2.52□□□□□ -2.01
SNX41YDR425W ZDS2P54786 942 aa2.52□□□□□ -2.01
SNX41YDR425W TIM11P81449 96 aaPredicted RBP2.52□□□□□ -2.01
SNX41YDR425W MRPL13Q02204 264 aa2.52□□□□□ -2.01
SNX41YDR425W NGL3Q03210 505 aa2.52□□□□□ -2.01
SNX41YDR425W YMR254CQ04838 102 aa2.52□□□□□ -2.01
SNX41YDR425W MMR1Q06324 491 aa2.52□□□□□ -2.01
SNX41YDR425W LPD1P09624 499 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W CDC23P16522 626 aa2.52□□□□□ -2.01
SNX41YDR425W TKL1P23254 680 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W RAD57P25301 460 aa2.52□□□□□ -2.01
SNX41YDR425W CDC10P25342 322 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W IMP2'P32351 346 aa2.52□□□□□ -2.01
SNX41YDR425W SAC1P32368 623 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W SRB4P32569 687 aa2.52□□□□□ -2.01
SNX41YDR425W LAS1P36146 502 aaPredicted RBP2.52□□□□□ -2.01
SNX41YDR425W SIP3P38717 1229 aa2.52□□□□□ -2.01
SNX41YDR425W ECM10P39987 644 aa2.52□□□□□ -2.01
SNX41YDR425W PSF2P40359 213 aa2.52□□□□□ -2.01
SNX41YDR425W SHQ1P40486 507 aaPredicted RBP2.52□□□□□ -2.01
SNX41YDR425W INA22P40576 216 aa2.52□□□□□ -2.01
SNX41YDR425W MAF1P41910 395 aa2.52□□□□□ -2.01
SNX41YDR425W FYV8P46949 817 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W VID30P53076 958 aa2.52□□□□□ -2.01
SNX41YDR425W JJJ1P53863 590 aa2.52□□□□□ -2.01
SNX41YDR425W YNL181WP53878 407 aa2.52□□□□□ -2.01
SNX41YDR425W GTR1Q00582 310 aa2.52□□□□□ -2.01
SNX41YDR425W KRE28Q04431 385 aa2.52□□□□□ -2.01
SNX41YDR425W SPC24Q04477 213 aa2.52□□□□□ -2.01
SNX41YDR425W BLS1Q06071 122 aa2.52□□□□□ -2.01
SNX41YDR425W CSR1Q06705 408 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W COX17Q12287 69 aa2.52□□□□□ -2.01
SNX41YDR425W OCA6Q12454 224 aa2.52□□□□□ -2.01
SNX41YDR425W PCD1Q12524 340 aa2.52□□□□□ -2.01
SNX41YDR425W VCX1Q99385 411 aa2.52□□□□□ -2.01
SNX41YDR425W NUP188P52593 1655 aaKnown RBP2.52□□□□□ -2.01
SNX41YDR425W DNF3Q12674 1656 aa2.51□□□□□ -2.01
SNX41YDR425W BUD2P33314 1104 aa2.51□□□□□ -2.01
SNX41YDR425W SOF1P33750 489 aaKnown RBP2.51□□□□□ -2.01
SNX41YDR425W NUP133P36161 1157 aa2.51□□□□□ -2.01
SNX41YDR425W HEK2P38199 381 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01 RIP-Chip
SNX41YDR425W YBR062CP38239 180 aa2.51□□□□□ -2.01
SNX41YDR425W IFA38P38286 347 aa2.51□□□□□ -2.01
SNX41YDR425W CTM1P38818 585 aa2.51□□□□□ -2.01
SNX41YDR425W TDA11P38854 504 aa2.51□□□□□ -2.01
SNX41YDR425W KAP123P40069 1113 aaKnown RBP2.51□□□□□ -2.01
SNX41YDR425W VID27P40157 782 aa2.51□□□□□ -2.01
SNX41YDR425W VTC2P43585 828 aa2.51□□□□□ -2.01
SNX41YDR425W TMA22P47089 198 aaPredicted RBP2.51□□□□□ -2.01
SNX41YDR425W PSP1P50896 841 aaKnown RBP2.51□□□□□ -2.01
SNX41YDR425W COG1P53079 417 aa2.51□□□□□ -2.01
SNX41YDR425W YNR061CP53747 219 aa2.51□□□□□ -2.01
SNX41YDR425W SUB1P54000 292 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 133.8 ms